Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0386 ATGGCCACCGTGCAACTCCAATCCCTAACCCTCATTCGCTCCTCCGCTTTCCCTTCCCTCACCGTCTCGCCTTCCATCTCCGCCTGCCGTAACCTTCCCACGTTGCCGCGCTACGCCGGCCTCAGACTCACACACGCCGCCGATACCCGTTTTCCGAGTCGCGCCGCCTCGAAAACTGCTCCTCGAAGTGGACGCGTCGCGTGTGAGGCTCGTGATACCGCCGTTCAAGTGGCTTCTGTTACTGATGCAAATTGGCAATCACTTGTGCTTGAATCTGAGTTACCTGTATTGGTTGAATTCTGGGCTCCATGGTGTGGTCCCTGCCGAATGATCCACCCGATAATTGATGAGCTGGCAAAGGAGTATGCTGATAAGCTTAAGTGTTACAAACTCAATACTGATGAGAGCCCTTCAACTGCTACTCGGTATGGCATTCGAAGTATTCCAACTGTCATTGTCTTCAAGAATGGTGAGAAGAAAGATGCAGTTATTGGTGCTGTGCCCAAGGCGACATTGACCTCAAGCTTAGAAAAATTCTTGTGA 543 0.5175 MATVQLQSLTLIRSSAFPSLTVSPSISACRNLPTLPRYAGLRLTHAADTRFPSRAASKTAPRSGRVACEARDTAVQVASVTDANWQSLVLESELPVLVEFWAPWCGPCRMIHPIIDELAKEYADKLKCYKLNTDESPSTATRYGIRSIPTVIVFKNGEKKDAVIGAVPKATLTSSLEKFL* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0386 180 CDD TRX_family 83 177 - -
Apr2g0386 180 Gene3D Glutaredoxin 76 180 - -
Apr2g0386 180 PANTHER GEO12009P1 1 180 - -
Apr2g0386 180 SUPERFAMILY Thioredoxin-like 74 180 IPR036249 -
Apr2g0386 180 TIGRFAM thioredoxin: thioredoxin 81 179 IPR005746 GO:0015035
Apr2g0386 180 PRINTS Thioredoxin family signature 96 104 - -
Apr2g0386 180 PRINTS Thioredoxin family signature 104 113 - -
Apr2g0386 180 PRINTS Thioredoxin family signature 144 155 - -
Apr2g0386 180 ProSiteProfiles Thioredoxin domain profile. 45 180 IPR013766 -
Apr2g0386 180 Pfam Thioredoxin 77 177 IPR013766 -
Apr2g0386 180 ProSitePatterns Thioredoxin family active site. 97 115 IPR017937 -
Apr2g0386 180 PANTHER THIOREDOXIN M-TYPE PROTEIN 1 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0386 Apr-Chr2 4583266 4585651 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0386 K03671 - gmx:100526924 281.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0386 2 4583266 4585651 Apr2g0386 2 4583266 4585651 ECH