Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0379 ATGGCGAAGAAGAAGGAGAAGAAGGTGAACGTCTCCGGAAAACCGAAGCACTCTCTCGACGTTAATCGCAGCAATGACAGCAAGAAGGAGTCGCGCTCCGCCGCCACCGTACGCCGCCTCAAGATGTACAACACTAGGCCCGTTCGTGACCGCAAGGGAAAAGTCCTCTCCAACGAGTTTCAATCAAAGGACCTTCCCTCCACGCGAATCCAACCTGATCGCCGATGGTTCGGGAACACTCGGGTTGTGAATCAGAAAGAGCTCGAGTTCTTCCGAGAAGAGCTGCAGAGCCGCATGTCGAGTAGCTACAATGTTATTCTCAAGGAGAAGAAACTTCCACTGTCACTCCTCAACGATCACCAGAAGCAAGCCAGGGTTCACCTTCTTGATAGAGAGCCTTTCCAAGATGCATTTGGACCTAAGACTAAAAGAAAGCGTCCCAGCCTCTTGGCGGCTGATTATGAGTCCTTAGTTAAGAAAGCTGATGGTTCTCAAGAGGCTTTTGAACAGAAGTATGATTCAGCTGTATCTGCAGAAACTAGTGATGGAGATGGATTTAGAGATTTAGTGCGCCATACCATGTTTGAAAAGGGTCAAAGTAAACGCATATGGGGCGAGCTTTACAAAGTGATAGATTCTTCGGATGTTGTTGTCCAGGTTCTAGATGCAAGGGACCCACAAGGCACAAGATGTTACCATTTAGAGAAGCATTTGAAGGAAAATTGCAAGCACAAACACATGGTGCTTTTATTGAACAAGTGTGATCTAGTTCCTGCTTGGGCAACAAAAGGATGGCTTAGAGTTTTGTCAAAAGAATTTCCAACTCTAGCATTCCATGCAAGCATTAATAAGTCCTTTGGAAAAGGTTCACTTCTATCAGTTCTGAGACAATTTGCGCGATTGAAACGCGATAAGCAAGCAATATCTGTTGGATTTGTTGGATATCCAAATGTTGGGAAGTCATCAGTAATCAATACATTGAGAACAAAGAATGTTTGCAAGGTTGCTCCAATTCCAGGGGAAACAAAAGTCTGGCAGTATATAACTCTTACAAAGAGGATCTTTCTAATTGATTGTCCAGGTGTTGTCTACCACAATAATGATTCTGAAACAGATGTTGTGTTGAAGGGTGTGGTACGTGTAACAAACTTGAAAGATGCTGCAGACCATATAGGTGAGGTTTTGAAACGTGTGAAGAAAGAGCATTTGGAAAGAGCATATAGAATAAAAGAGTGGGATGATGAAAATGACTTCTTACTTCAGCTTTGCAAATCAACTGGCAAACTTCTGAAGGGTGGTGAGCCTGACCTGATGACTGCTGCAAAGATGGTTCTTCACGACTGGCAGAGGGGTAAAATTCCTTTTTTTGTTCCTCCTCCACGGCTGGATGACTTGTCTGAGGAACCTAATGTTAATGGCATTACTGTGGATGATGCGGTTGATGGCAATGAGGCATCTGCTGCTATTAAAGCTATCTCAGATGTTCTTTCATCGCAGCAGCAGATAAGTGTACCTGTTCAAAGGGATTTATATAGCGAGAATGAGTTGAAGGGGGAAACTACTGAGCAACTTCCAAACACGGGGGAAAATCTGTATGAAGATAGTCTGAACCCTGATAGTGATACATCTGAGCAGGATCCAGCTACTGAGATTCCATCTGAGCAGCTTTCTACTGAGCTAGTCCCAACCAGTGAGTTGTAA 1701 0.4409 MAKKKEKKVNVSGKPKHSLDVNRSNDSKKESRSAATVRRLKMYNTRPVRDRKGKVLSNEFQSKDLPSTRIQPDRRWFGNTRVVNQKELEFFREELQSRMSSSYNVILKEKKLPLSLLNDHQKQARVHLLDREPFQDAFGPKTKRKRPSLLAADYESLVKKADGSQEAFEQKYDSAVSAETSDGDGFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLEKHLKENCKHKHMVLLLNKCDLVPAWATKGWLRVLSKEFPTLAFHASINKSFGKGSLLSVLRQFARLKRDKQAISVGFVGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYHNNDSETDVVLKGVVRVTNLKDAADHIGEVLKRVKKEHLERAYRIKEWDDENDFLLQLCKSTGKLLKGGEPDLMTAAKMVLHDWQRGKIPFFVPPPRLDDLSEEPNVNGITVDDAVDGNEASAAIKAISDVLSSQQQISVPVQRDLYSENELKGETTEQLPNTGENLYEDSLNPDSDTSEQDPATEIPSEQLSTELVPTSEL* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0379 566 MobiDBLite consensus disorder prediction 515 566 - -
Apr2g0379 566 Gene3D - 194 364 IPR027417 -
Apr2g0379 566 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 204 365 IPR030378 GO:0005525
Apr2g0379 566 PANTHER NUCLEOLAR GTP-BINDING PROTEIN 2 2 546 IPR024929 GO:0005730
Apr2g0379 566 Gene3D - 365 457 IPR023179 -
Apr2g0379 566 PANTHER GTP-BINDING PROTEIN-RELATED 2 546 - -
Apr2g0379 566 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 200 435 IPR027417 -
Apr2g0379 566 MobiDBLite consensus disorder prediction 1 36 - -
Apr2g0379 566 PRINTS GTP1/OBG GTP-binding protein family signature 310 330 IPR006073 GO:0005525
Apr2g0379 566 PRINTS GTP1/OBG GTP-binding protein family signature 356 371 IPR006073 GO:0005525
Apr2g0379 566 Pfam NGP1NT (NUC091) domain 42 166 IPR012971 -
Apr2g0379 566 Pfam 50S ribosome-binding GTPase 310 412 IPR006073 GO:0005525
Apr2g0379 566 MobiDBLite consensus disorder prediction 517 566 - -
Apr2g0379 566 CDD NGP_1 206 362 - -
Apr2g0379 566 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0379 Apr-Chr2 4528410 4534203 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0379 K14537 - gmx:100781028 1016.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0379 2 4528410 4534203 Apr2g0379 2 4528410 4534203 ECH