Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0377 ATGGATCGATTGCTGAAAGCAGCGAGAGCCTCTGGTTCTCTCAACCTCTCCAATCGCTCCCTCAGAGAAGTTCCAGATGAGGTTTATCGGAATCTGGAGGGGCTCGGCGGCGACGACAAGTGGTGGGAGGCTGTGGAGCTTCAGAAGCTTATTCTGGCTCACAATAGTATTGAATCGTTGAAGGAAGATCTGAGAAATTTGCCGTTTCTTGCTGTTTTGAATCTTAGTCATAACTGTCTTTCACAGCTTCCCGCTGCTATAGGAGAGCTGCTTCAGTTGAAAATGTTGGATGTTTCGTTCAATTCGATACTTAAAATACCGGAGGAGATTGGATCAGCTGCCTCGCTTGTGAAGCTTGATTGTTCTAATAATCGGCTCACAGAACTTCCTAGCTCGCTTGGCAGATGCTTAGAATTGTCGGACTTAAAGGGATCAAACAATCTTATTGCAGGCTTGCCAGAAGATTTAGCAAATTGTGTGAAATTGTCTAAGCTAGATGTGGAGGGAAACAAAATAACAGGGATATCTGAAAATCTCATTTCATCATGGACAGCACTTACTGAATTCAATGCATCAAAAAATTTACTGAATTGTATACCAGTCAGCATTGGAGGCCTTTCTCGTTTAATTCGTCTTGACCTCCATCAAAACAGAATATCAGCTATCCCTTCATCAATCATTGGCTGTCATTCACTTACAGAGCTTTATTTGGGGAATAATAGTATTTCTACAGTACCAGTGGAGATAGGTGCCCTTTCTCGACTTGGAACTTTAGATCTTCACTCTAACAAGCTGAAGGAATATCCAGTGGAGGCATGCAAATTGAGTCTTTTAGTTTTGGATCTTTCAAACAATTCATTGAGTGGGTTACCCCCTGAAATGGGCAAGATGACTACCTTGAGGAAACTTCTGCTTAGTGGAAATCCTTTGAGGACTCTTCGAAGCTCATTAGTATCTGGACCTACACCAGCATTACTGAAATTTCTCCGAAGTAGACTTTCTGAAGATTCTGAAGCTATCACCACTACAAAAGAAGAGGTGATTGCAATGGCTACCCGATTGTCTCTCACTTCAAAGGAACTGTCTATGGAGGGGTTGGGGTTGAGTGTTGTTCCATCAGAAGTATGGGAATCAGGGGAGGTCATAAAACTTAATCTTTCCAGAAACTCCATCCAGGAATTGCCAGTCGAACTTTCTTCTTGTGTTGCCCTCCAGACATTGAATTTATCTAAGAATCAAATTAAAGACTGGCCAGGTTCAATTCTTAAATCACTTTCAAATCTTTCATGTTTGAAGCTCGACAACAATCCCCTCACGCAGATACCTTCAGATGGCTTTGAAGCGGTGCCAAAGCTGCAGATCCTAGATCTAAGTGGCAATGCAGCTTCATTACTAGATGGTCCTGCATTTTCTAGTTTGCTAAACCTGCAAGAGCTTTACCTGAGAAGAATGCGGCTCAGTGAAGTTCCATCAGATATATTGGGGTTGCGTCAACTACAGATCCTTAACTTGAGTCAGAATTCCCTTCAATCAATTCCAGTGGGGTTAGAAAACCTCACTTCTCTCAAGGAGCTTGACCTATCTGATAACAGCATCTCAGCCCTTCCGCCAGAGCTGGGTTTGCTGGAACCAAGCCTTCAGGCACTGAGACTTGAAGGGAATCCTCTCAGAAGCATTCGAAGGGCTGTCTTGGATAAGGGAACTAAAGCTGTTCTGAAATATTTGAAGGACAAATTACCGGAGCAATAG 1749 0.4294 MDRLLKAARASGSLNLSNRSLREVPDEVYRNLEGLGGDDKWWEAVELQKLILAHNSIESLKEDLRNLPFLAVLNLSHNCLSQLPAAIGELLQLKMLDVSFNSILKIPEEIGSAASLVKLDCSNNRLTELPSSLGRCLELSDLKGSNNLIAGLPEDLANCVKLSKLDVEGNKITGISENLISSWTALTEFNASKNLLNCIPVSIGGLSRLIRLDLHQNRISAIPSSIIGCHSLTELYLGNNSISTVPVEIGALSRLGTLDLHSNKLKEYPVEACKLSLLVLDLSNNSLSGLPPEMGKMTTLRKLLLSGNPLRTLRSSLVSGPTPALLKFLRSRLSEDSEAITTTKEEVIAMATRLSLTSKELSMEGLGLSVVPSEVWESGEVIKLNLSRNSIQELPVELSSCVALQTLNLSKNQIKDWPGSILKSLSNLSCLKLDNNPLTQIPSDGFEAVPKLQILDLSGNAASLLDGPAFSSLLNLQELYLRRMRLSEVPSDILGLRQLQILNLSQNSLQSIPVGLENLTSLKELDLSDNSISALPPELGLLEPSLQALRLEGNPLRSIRRAVLDKGTKAVLKYLKDKLPEQ* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0377 582 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 14 131 - -
Apr2g0377 582 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 136 227 - -
Apr2g0377 582 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 212 582 - -
Apr2g0377 582 SMART LRR_bac_2 113 132 - -
Apr2g0377 582 SMART LRR_bac_2 229 248 - -
Apr2g0377 582 SMART LRR_bac_2 378 397 - -
Apr2g0377 582 SMART LRR_bac_2 90 109 - -
Apr2g0377 582 SMART LRR_bac_2 496 515 - -
Apr2g0377 582 SMART LRR_bac_2 67 86 - -
Apr2g0377 582 SMART LRR_bac_2 185 202 - -
Apr2g0377 582 SMART LRR_bac_2 519 539 - -
Apr2g0377 582 SMART LRR_bac_2 159 178 - -
Apr2g0377 582 SMART LRR_bac_2 274 294 - -
Apr2g0377 582 ProSiteProfiles Leucine-rich repeat profile. 403 424 IPR001611 GO:0005515
Apr2g0377 582 Gene3D Ribonuclease Inhibitor 272 318 IPR032675 -
Apr2g0377 582 ProSiteProfiles Leucine-rich repeat profile. 46 68 IPR001611 GO:0005515
Apr2g0377 582 SUPERFAMILY L domain-like 41 317 - -
Apr2g0377 582 ProSiteProfiles Leucine-rich repeat profile. 521 542 IPR001611 GO:0005515
Apr2g0377 582 PANTHER LRR RECEPTOR-LIKE KINASE 212 582 - -
Apr2g0377 582 PANTHER LRR RECEPTOR-LIKE KINASE 14 131 - -
Apr2g0377 582 PANTHER LRR RECEPTOR-LIKE KINASE 136 227 - -
Apr2g0377 582 PRINTS Leucine-rich repeat signature 277 290 - -
Apr2g0377 582 PRINTS Leucine-rich repeat signature 519 532 - -
Apr2g0377 582 ProSiteProfiles Leucine-rich repeat profile. 498 520 IPR001611 GO:0005515
Apr2g0377 582 Pfam Leucine rich repeat 426 483 IPR001611 GO:0005515
Apr2g0377 582 Pfam Leucine rich repeat 208 265 IPR001611 GO:0005515
Apr2g0377 582 Pfam Leucine rich repeat 497 556 IPR001611 GO:0005515
Apr2g0377 582 Pfam Leucine rich repeat 46 103 IPR001611 GO:0005515
Apr2g0377 582 Pfam Leucine Rich Repeat 277 292 IPR001611 GO:0005515
Apr2g0377 582 SUPERFAMILY L domain-like 359 557 - -
Apr2g0377 582 SMART LRR_typ_2 544 566 IPR003591 -
Apr2g0377 582 SMART LRR_typ_2 473 495 IPR003591 -
Apr2g0377 582 SMART LRR_typ_2 496 518 IPR003591 -
Apr2g0377 582 SMART LRR_typ_2 519 542 IPR003591 -
Apr2g0377 582 SMART LRR_typ_2 425 448 IPR003591 -
Apr2g0377 582 SMART LRR_typ_2 114 136 IPR003591 -
Apr2g0377 582 SMART LRR_typ_2 90 113 IPR003591 -
Apr2g0377 582 SMART LRR_typ_2 159 182 IPR003591 -
Apr2g0377 582 SMART LRR_typ_2 45 66 IPR003591 -
Apr2g0377 582 SMART LRR_typ_2 67 88 IPR003591 -
Apr2g0377 582 SMART LRR_typ_2 230 251 IPR003591 -
Apr2g0377 582 SMART LRR_typ_2 297 320 IPR003591 -
Apr2g0377 582 SMART LRR_typ_2 276 296 IPR003591 -
Apr2g0377 582 SMART LRR_typ_2 379 401 IPR003591 -
Apr2g0377 582 SMART LRR_typ_2 402 424 IPR003591 -
Apr2g0377 582 SMART LRR_typ_2 206 229 IPR003591 -
Apr2g0377 582 SMART LRR_typ_2 449 472 IPR003591 -
Apr2g0377 582 SMART LRR_typ_2 252 275 IPR003591 -
Apr2g0377 582 Gene3D Ribonuclease Inhibitor 178 271 IPR032675 -
Apr2g0377 582 Gene3D Ribonuclease Inhibitor 327 466 IPR032675 -
Apr2g0377 582 Gene3D Ribonuclease Inhibitor 467 578 IPR032675 -
Apr2g0377 582 Gene3D Ribonuclease Inhibitor 1 177 IPR032675 -
Apr2g0377 582 SMART LRR_sd22_2 159 181 - -
Apr2g0377 582 SMART LRR_sd22_2 496 518 - -
Apr2g0377 582 SMART LRR_sd22_2 90 112 - -
Apr2g0377 582 SMART LRR_sd22_2 206 231 - -
Apr2g0377 582 SMART LRR_sd22_2 401 430 - -
Apr2g0377 582 SMART LRR_sd22_2 519 534 - -
Apr2g0377 582 ProSiteProfiles Leucine-rich repeat profile. 427 448 IPR001611 GO:0005515
Apr2g0377 582 ProSiteProfiles Leucine-rich repeat profile. 276 297 IPR001611 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0377 82 556 Receptor kinase-like Gene Family AT5G56040 27.237 9.36e-16 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0377 - - gmx:100781571 956.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0377 2 4509917 4519877 Apr2g0377 2 4509917 4519877 ECH