Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0371 ATGGCTCTCCAAGCTGCTTCTTTGGTTCCTGCTTCTTTCTCCATTCCTAAAGAGGGAAAATCTAGTGCTTCTCTCAAGGACTCCACTTTGTTTGGTCTTTCATTGTCAGAATCTCTCAAAGCTGACTTCAGCTCTTCTGCATTGAAGTACAAGAGGGAATTCCAACAAAGAGCTGGTTCTGTGAGGGCTGAGACAGTGGCTACAACAACTCCAGCAGTTAACAAGTCTGCACCAGAAGGCAAGAAAACATTGAGGAAGGGCAATGTTGTGATCACTGGAGCTTCCTCTGGATTAGGCTTGGCCACTGCTAAGGCTTTGGCTGAGACAGGAAAATGGCATGTAATTATGGCCTGCAGGGATTTCCTCAAAGCTGCAAGAGCTGCAAAATCTGCTGGCATAGCGAAGGAAAACTACACCATCATGCACTTAGACCTTGCCTCTCTTGACAGCGTTCGCCAATTTGTAGAGAACTTCAGAAGACCAGACATGCCACTTGATGTGCTGGTTTGCAATGCTGCTGTGTACTTACCAACTGCAAAGGAACCTACCTTCACTGCTGATGGCTTTGAACTTAGTGTTGGGACAAACCATCTAGGGCATTTTCTCCTTGCGCGCCTGATGCTTGAGGACTTGAACAAATCTGATTACCCTTCAAAGCGATTGATCATCGTTGGTTCAATCACAGGGAACACAAACACATTGGCTGGAAATGTACCTCCCAAGGCTAACCTTGGTGACTTGAGGGGACTTGCCGGTGGCTTGAATGGACTAAACAGTTCATCTATGATAGATGGTGGAGACTTTGATGGCGCCAAGGCATACAAGGACAGCAAAGTGTGTAATATGCTCACAATGCAAGAATTCCACAGACGATACCACGAGGAAACTGGAATCACATTTGCTTCACTCTACCCAGGTTGCATTGCCACAACAGGCTTGTTTAGAGAGCACATTCCCTTGTTCAGAACCCTCTTCCCTCCATTCCAAAAGTACATAACCAAAGGCTTTGTCTCAGAAGATGAAGCAGGAAAGAGACTTGCTCAGGTTGTGAGTGAACCAAGCCTAACAAAGTCTGGTGTTTACTGGAGCTGGAATAAAGCCTCAGCTTCATTTGAAAACCAGCTGTCACAGGAAGCAAGTGATGCAGAGAAGGCTCGTAAGGTGTGGGAGATTAGTGAGAAACTTGTTGGTTTGGCCTAA 1200 0.4617 MALQAASLVPASFSIPKEGKSSASLKDSTLFGLSLSESLKADFSSSALKYKREFQQRAGSVRAETVATTTPAVNKSAPEGKKTLRKGNVVITGASSGLGLATAKALAETGKWHVIMACRDFLKAARAAKSAGIAKENYTIMHLDLASLDSVRQFVENFRRPDMPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLARLMLEDLNKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLNGLNSSSMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRTLFPPFQKYITKGFVSEDEAGKRLAQVVSEPSLTKSGVYWSWNKASASFENQLSQEASDAEKARKVWEISEKLVGLA* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0371 399 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 83 366 IPR036291 -
Apr2g0371 399 CDD LPOR_like_SDR_c_like 86 398 - -
Apr2g0371 399 Pfam short chain dehydrogenase 89 231 IPR002347 -
Apr2g0371 399 Gene3D - 75 399 - -
Apr2g0371 399 PANTHER - 1 398 IPR005979 GO:0016630
Apr2g0371 399 PANTHER NADPH-PROTOCHLOROPHYLLIDE OXIDOREDUCTASE 1 398 - -
Apr2g0371 399 PRINTS Glucose/ribitol dehydrogenase family signature 88 105 IPR002347 -
Apr2g0371 399 PRINTS Glucose/ribitol dehydrogenase family signature 163 174 IPR002347 -
Apr2g0371 399 PRINTS Glucose/ribitol dehydrogenase family signature 296 313 IPR002347 -
Apr2g0371 399 TIGRFAM LPOR: light-dependent protochlorophyllide reductase 85 399 IPR005979 GO:0016630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0371 Apr-Chr2 4463882 4468301 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0371 K00218 - gmx:100785637 702.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0371 2 4463882 4468301 Apr2g0371 2 4463882 4468301 ECH