Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0367 ATGGCAATGAACTTCCAAAGAAGGCTTTTCAGTCACCTAAGGAGAACACATTTGGTGACAAAGAGAGTTATGGAACCGTGTGATGCGTTCCTCAACCACAGGTGCATGGACACAAAGAAAACAGTGGCTACACTGCTTTATGATCATCTTAAGCGACACGGATTCAACCCTTTCTTGGACAACAAGAACATGAAGCCAGGGGACAAACTGTTCGAAAAAATCGATAGGGCAGTTATGGAATGCAAAATTGGTGTAGCAGTTTTCTCCCCTCACTACACAGAATCATACTTTTGCCTGCATGAGTTGGCACTTCTCATGGGTTGCAATAAGAAGGTTATACCTATCTTTTGTGATGTTAAGCCTTCTCAGTTGCGCGTTGTTAACAATCCAAAATGGTCTGAAAATGATCTTCGCCGGTTTAGATGGGCTCTTGAGGAGGCTAAGTACACTGTCGGACTCACGTTCAATTCCTCTAAAGGAAACTTCTCCGAAATTGTGAATAGTGCTTCTGACATAATCATTGGCAGCATGATAGAGCTTGAGAATGAAGCACAGATGCAGCATAAAAACTTACCAATTCATCTTTAG 588 0.4218 MAMNFQRRLFSHLRRTHLVTKRVMEPCDAFLNHRCMDTKKTVATLLYDHLKRHGFNPFLDNKNMKPGDKLFEKIDRAVMECKIGVAVFSPHYTESYFCLHELALLMGCNKKVIPIFCDVKPSQLRVVNNPKWSENDLRRFRWALEEAKYTVGLTFNSSKGNFSEIVNSASDIIIGSMIELENEAQMQHKNLPIHL* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0367 195 Gene3D - 23 176 IPR035897 -
Apr2g0367 195 SUPERFAMILY Toll/Interleukin receptor TIR domain 27 149 IPR035897 -
Apr2g0367 195 ProSiteProfiles TIR domain profile. 25 148 IPR000157 GO:0007165
Apr2g0367 195 Pfam TIR domain 29 125 IPR000157 GO:0007165
Apr2g0367 195 SMART till_3 26 159 IPR000157 GO:0007165
Apr2g0367 195 PANTHER COP1-INTERACTING PROTEIN-RELATED 18 189 - -
Apr2g0367 195 PANTHER TOLL-INTERLEUKIN-RESISTANCE (TIR) DOMAIN FAMILY PROTEIN 18 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0367 Apr-Chr2 4394880 4396117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0367 30 120 Miscellaneous Gene Families AT1G57670 37.113 5.79e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0367 - - gmx:100784606 342.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0367 2 4394880 4396117 Apr2g0367 2 4394880 4396117 ECH