Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0366 ATGGATCAAGAGTTGGCAGATATAGAGTCTCAAACTGAGGAAACCCCTAATATCCACCACAAAGGAAAAAGTCCAGTGATTCTGAAGTTTGATGATGTTGTGTATAAAATTAAAACAAAGAAAGGTGGGTTACTAAAGAAGAAAAGGGATGCAGAAGAGAAAGTGATACTAAAGGGAGTGACAGGTATTGTTGAACCTGGTGAAATGCTAGCCATGTTAGGTCCATCAGGAAGTGGCAAAACAACTTTGCTTACAGCATTGGGAGGAAGGCTTGGAGGGAGGCTTGGAGGGAGCATAACATACAATGGTCAAGCATTTTCCAATGCAATAAAGAGGAACACTGGTTTTGTTTCCCAAGATGATGTTCTTTACCCCCACTTGACTGTGACTGAGACCCTTGTGTTCACTGCACTTCTTAGATTGCCTAATAGTATCACCAAAGAAGAGAAAGTTGAGCATGCAAAAGCTGTGATAGATCAACTTGGTTTGACCAAGTGTAAGGATAGCATTGTTGGAAGCCCATATTTGAGGGGAGTTTCTGGGGGGGAGAGAAAGAGGGTTAGCATTGGACAAGAATTACTAATAAACCCAAGCTTGTTGTTTCTTGATGAACCCACTTCTGGCCTAGACTCAACCACGGCACAAAGAATTGTCTCAACCTTGTGGGAGCTTGCAAGTGGAGGGAGAACTATTGTGATGACAATACACCAACCTTCAAGTAGGTTATACTATTTGTTTCATAAGGTGTTGTTGCTATCAGAAGGGAACACGTTGTATTTTGGAAAGGGATCTGAAGCCATTGAATATTTTTCTAGTATTGGATATGCCCCAGCATTGGCCATGAACCCTTCAGACTTCCTTTTGGATCTTGCAAATGGTACGCTTCTTTTTTCTATGCATTTTAGCAAATATGAGATGTTATCTGCAGGTATCTACACTGATGCATTGAATGAGGACCACACCATAGATAAACAGAATTTAATTTCAATGTGTAAGAGAAACTTTGATGCACAATTGAAGCCAGCACTTGAAGGAACCATTGACTCTGGTAAAAGTCTGAGTAGATTTCAAGAAACAGAAAAATGGCCCACGAGTTGGTCGCAGCAATTCTTTGTGCTATTAAGAAGAGATGTCAAAGAGAGGAAGTACGAATCATTTTCTGGTCTGCGGATTGGTCAGGTCCTTGTGGTTGCACTCATTTCAGGACTACTTTGGTATAAGTCTGATATTTCACATTTGCAGGATCAGATTGGGCTTCTATTCTTCATATCTGGCTTTTGGGGGTTTTTTCCTCTCTTTCAAGCAATTTTCACCTTTCCTCAAGAGCTTATGATGCTAGAGAAAGAAAGATCCTCAGGAATGTATAGGCTTTCTTCATACTTCATGTCAAGGATGGTAGCTGATCTTCCAATGGAACTTGTTCTTCCGACAATCTTTCTTTGCATAACCTATTGGATGGCAGGGTTGAAAGCTAAAGTGGTCAATTTCTTGTATACACTTCTCAGCCTCTTACTAAATGTGTTAGTCTCCCAAGGCCTAGGCCTTGCAATTGGTGCTGGTGTAATGGATCAAAAATCAGCAACCACACTCGCCTCAGTGATTATGTTATGTTTTTTGCTAGCTGGTGGATTTTATGTTCAGCATGTTCCAAAGTTTATAGCATGGGTGAAGTACATTTCCATCAGCTACTACACTTACCAGCTCTTTATTGGGTCTCAATATAACTATGGTGAGACATACCCTTGTTCTAATGGCCAGTGCCAAATTTCAGGATTTCCTTCCATCAAGGAAATGGGGTTTCAGTTTCATTTGCATGGACAAATCATGGCTGCATCAGCATTAGTGATAATGCTAGTAGGTTACAGACTTATAGCTTATCTTGCTCTTATGAGGATTGGAGTGATAAAGAGCTTGGCCTAA 1920 0.4062 MDQELADIESQTEETPNIHHKGKSPVILKFDDVVYKIKTKKGGLLKKKRDAEEKVILKGVTGIVEPGEMLAMLGPSGSGKTTLLTALGGRLGGRLGGSITYNGQAFSNAIKRNTGFVSQDDVLYPHLTVTETLVFTALLRLPNSITKEEKVEHAKAVIDQLGLTKCKDSIVGSPYLRGVSGGERKRVSIGQELLINPSLLFLDEPTSGLDSTTAQRIVSTLWELASGGRTIVMTIHQPSSRLYYLFHKVLLLSEGNTLYFGKGSEAIEYFSSIGYAPALAMNPSDFLLDLANGTLLFSMHFSKYEMLSAGIYTDALNEDHTIDKQNLISMCKRNFDAQLKPALEGTIDSGKSLSRFQETEKWPTSWSQQFFVLLRRDVKERKYESFSGLRIGQVLVVALISGLLWYKSDISHLQDQIGLLFFISGFWGFFPLFQAIFTFPQELMMLEKERSSGMYRLSSYFMSRMVADLPMELVLPTIFLCITYWMAGLKAKVVNFLYTLLSLLLNVLVSQGLGLAIGAGVMDQKSATTLASVIMLCFLLAGGFYVQHVPKFIAWVKYISISYYTYQLFIGSQYNYGETYPCSNGQCQISGFPSIKEMGFQFHLHGQIMAASALVIMLVGYRLIAYLALMRIGVIKSLA* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0366 639 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 28 279 IPR003439 GO:0005524
Apr2g0366 639 SMART AAA_5 66 264 IPR003593 -
Apr2g0366 639 MobiDBLite consensus disorder prediction 1 21 - -
Apr2g0366 639 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 9 633 - -
Apr2g0366 639 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 9 633 - -
Apr2g0366 639 ProSitePatterns ABC transporters family signature. 179 193 IPR017871 GO:0005524
Apr2g0366 639 Pfam ABC-2 type transporter 236 298 IPR043926 GO:0140359
Apr2g0366 639 Pfam ABC transporter 57 207 IPR003439 GO:0005524
Apr2g0366 639 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 272 IPR027417 -
Apr2g0366 639 Pfam ABC-2 type transporter 368 574 IPR013525 GO:0016020|GO:0140359
Apr2g0366 639 Gene3D - 44 273 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0366 Apr-Chr2 4383839 4387239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0366 48 240 Calmodulin-binding Proteins AT2G36910 28.319 1.48e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0366 K05681 - gmx:100816135 971.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0366 2 4383839 4387239 Apr2g0366 2 4383839 4387239 ECH