Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0360 ATGGCCAACTTCCTCGCTCAGTTTCAGACTATTAAGAACACCTCCGATCGCCTCGTCATTTCAGTGGAGGATGTGAGTGACTTATGGCCAACTGTCAAGCCTGCTTTCGAGGCGCGGTTGCCCTTCAAAAGGGCGACTTTGAATAACAAGACGCGGAACCCTGTTTTCGTTGAGACATTGCCGGCCGAGTTCATATTAACTACAGATTCAAGACTCCGTAGCCGGTTCCCTCAGGAGCAGTTGTTATTTTGGTTTCGAGAGCCGTATGCGACTGTTGTACTTGTCACCTGTGAGGATCTGGATGAGTTCAAAACTATCCTTAAACCACGCCTGAAATTAATTGTCCAAAATGATGAAAGGGAATGGTTTATTGTATTTGTATGTAAAGCTCATCCATCTAATGATCAGGCAAACAAAATGGCAAAGAAAGTATATGCTAAACTTGAAGTTGAGTTTAGCTCCAAAAAAAGGGAAAGATGTTGCAAATATGATATGCATTTTCCAGAAGCAAACTTTTGGGAGGATCTAGAATCAAAGATAATGGAATGCATCAGAAATACCCTGGATAGACGTGTACAGTTTTATGAGGAGGAGATACGAAAGCTCAGTGAACAACGCTTCATGCCAGTCTGGAACTTCTGCAATTTTTTCATTCTGAAGGAAAGCTTGGCTTTTATGTTTGAAATGGCTCACCTTCACGAGGATGCCTTACGGGAATATGATGAACTAGAACTCTGCTATCTTGAAACAGTTAGCATGACTGGAAAGCAGAGAGACTTTGGAGGAGCAGATCATGGTGATGATCAGGCAGCATTACTTAACCCAGGAAACAAAGCATTGACGCAGATTGTTCAAGAGGACTCATTTAGGGAGTTTGAATTCCGACAGTATCTATTTGCCTGTCAATCAAAGCTCTTATTCAAGTTAAACCGTCCCATTGAGGTTGCATCACGAGGTTATTCATTCATAATAAGCTTCTCAAAATCCTTGGCATTGCATGAGCGTATTCTGCCTTTTTGCATGCGCGAAGTTTGGGTAGTAACTGCTTGCTTTGCTTTAATTGAAGCAACCACTTCTAATTATAATGATGAACTTCTGGCACCTGACATAGAGAAGGAGTTGTTTCGTCTTTTGGGTGACCTACACTCTCTTGCTAGAGTTAAGTTCATGAGGCTTGCCTATTTAATTGGGTACGGAGCTGATATAGAAAGAAGTCCTGTCAACAGTGCTTCCCTCAGCTTGCTACCTTGGCCTAAGCCAGCCATCTGGCCTTCAGTTCCTGCTGATGCATCAGCAGAGGTGCTAGAGAAAGAAAAGCTGATTCTCCAAACAACTTCTAGAACCAAGCACTTCGGTATTCAGAGGAAACCACTGCCTCTTGAACCTACTGTTCTTCTACGGGAGGCCAATAGGCGGAGGGCTTCTCTTTCAGCTGGAAATGTGTCTGAAATGTTTGACAATCGCCAAGGTGCAATGGAAGGATCAGGTTTCGATGCATCCGCAAGAATGTCACCACAAAAAACCCTTGCAAGTTCCATGTCACGTACAAATTCTTCACCAGGAAACTTTGATAGCTTAATTGACCGACCAATGAGGCTTGCCGAGATTTATATTGCTGCTGAGCATGCTTTGAAGCAAACAATTTCTAATCCAGAACTTTTGAAATCGTTATCATCATCTGAGGAATTTGAGCAAAAATATTTAGGGCTGACTAAAGGTGCTGCTGACAATTACCATCGTTCCTGGTGGAAAAGACATGGTGTTGTCCTTGATGGTGAGATAGCAGCTATCTCCTTTAAGCATGGACATTTTGATCAAGCTGCAAAGTCATATGAGAAGGTTTGTGCATTGTATGCTGGTGAAGGATGGCAGGACTTGTTGGCTGAGGTCCTTCCCAATTTAGCCGAGTGTCAGAAGATACTTAATGATCAAGCTGGCTACTTACTATCTTGTGTTAGATTACTTTCTCTTGATGAAGGATTATTTTTGACCAAGGAACGTCAAGCTTTTCGGTCAGAAGTTGTTCGTCTTGCTCATAGTGAAATGAAGGACCCTGTACCTCTTGATGTATCATCATTAATTACATTTTCTGGAAATCCTGGGCCTCCATTGGAGTTATGTGATAAGGATCCCGGTATCCTTTCTGTAACTGTTTGGAGTGGCTTTCCAGATGATATAACTCTTGATTCAATCAGTCTTACATTAAATGCAACATATAATGCTGATGATGGTGTGAAGGCATTGAAGAGTTCTACAGCTATTGTGTTACACCCTGGTCGAAATACTATCACCTTGGATCTACCACCTCAGAAACCAGGATCCTATGTTCTTGGAGTTCTTACTGGGCAGATTGGGCAGTTGAGGTTTAGATCTCATAGTTTTTCGAAAGTTGGTCCTGCAGATAGTGATGATTTTATGAGTTATGAAAAACCAGCTAAACCCATTCTGAAGGTTTTCAAACCTAGAGCCCTTGTTGATCTTGATGCTGCTGTTTCATCTGCTTTGTTGATAAATGAAGACCAATGGGTTGGCATTTTAGTCCGACCAGTAAATTACTCCCTTAAATCTGCTATATTGCATATTGATACTGGTCCAGGGTTGGAGATTGAAGAGTCAAACATAATTGAGATGGAAAGCTATGCTGGGAAATCGCGATATGATGACCAGGTGCAGAAGGATGGTGGTCAAATAAGAACTCTAGATTCTGATAAAAATTTTGAAAGATTGACTCTTCATGATGGTAAAATAGAATTTCCAAATTGGGCAAGTGACACTCCTTCTATTCTTTGGGTTCTGGTTCGTGCCATCAGTGACACACTCAGCACAGGATCATCTTCAGCCACAACAAGGAGAGAGAGTATTGTAGATGGAATGAGAACAATAGCTCTGAAACTTGAATTTGGAGCATTCCACAACCAGACATTTGAAAGGACCCTAGCAGTGCATTTTACATATCCTTTCTACGTGAGGACACGTGTTACTGATAAATGCAATGATGGTACCCTGATTCTGCAGGTAATCCTTCACTCCGAAGTAAAGGCTACATTGACCATATATGATGCTTGGCTTGATCTTCAAGATGGATTTGCTCATAGTGGTCAAACTGAGGGTAGACCTAATTCAAGTTTCTTCCCACTAATCATATCCCCCTCTTCCAAAGCAGGAATTTTGTTTAGTATCTGCCTAGACAAGACAAATCGTGATTTACCTGTGGCAGAAAGCATATTAAATATCAAATATGGAATTTCTGGTGATAGAACAATTGGTGCCCACCCTCCTGTTATGAATGAATCTACAGGAGCTGATGGTGCAAAACAGGAGTTAATCTTCAGGAGTGCAATTACTTTGCAAAGGCCTGTGCTTGATCCATGCCTAGCTGTTGGTTTTCTTCCTCTCCCATCAGATGGCCTAAGAGTTGGACAACTAGTTAAGATGCAATGGAGAGTGGAAAGGTTAAAGGATTTGAATGAGAAAGAAGTCTATAAACAGCATGATGAGGTGCTGTACGAGGTAAATGCAAATTCTGGAAATTGGATGATAGCTGGGAGGAAAAGAGGACATGTATCTCTGTCCACAAAACAAGGTGCAAGGATAATTATCTCAGTATTATGCATGCCATTGGTGGCTGGTTATGTTCGCCCTCCTCTACTTGGGCTGCCAGATATTGATGAGGCAAATATAAGCTGCAAACCTGCTGGGCCACATCTGGTTTGTGTTTTGCCACCGGCTCTCAGCTCATCCTTCTGCATTCCAGTTAATTCATGA 3765 0.4191 MANFLAQFQTIKNTSDRLVISVEDVSDLWPTVKPAFEARLPFKRATLNNKTRNPVFVETLPAEFILTTDSRLRSRFPQEQLLFWFREPYATVVLVTCEDLDEFKTILKPRLKLIVQNDEREWFIVFVCKAHPSNDQANKMAKKVYAKLEVEFSSKKRERCCKYDMHFPEANFWEDLESKIMECIRNTLDRRVQFYEEEIRKLSEQRFMPVWNFCNFFILKESLAFMFEMAHLHEDALREYDELELCYLETVSMTGKQRDFGGADHGDDQAALLNPGNKALTQIVQEDSFREFEFRQYLFACQSKLLFKLNRPIEVASRGYSFIISFSKSLALHERILPFCMREVWVVTACFALIEATTSNYNDELLAPDIEKELFRLLGDLHSLARVKFMRLAYLIGYGADIERSPVNSASLSLLPWPKPAIWPSVPADASAEVLEKEKLILQTTSRTKHFGIQRKPLPLEPTVLLREANRRRASLSAGNVSEMFDNRQGAMEGSGFDASARMSPQKTLASSMSRTNSSPGNFDSLIDRPMRLAEIYIAAEHALKQTISNPELLKSLSSSEEFEQKYLGLTKGAADNYHRSWWKRHGVVLDGEIAAISFKHGHFDQAAKSYEKVCALYAGEGWQDLLAEVLPNLAECQKILNDQAGYLLSCVRLLSLDEGLFLTKERQAFRSEVVRLAHSEMKDPVPLDVSSLITFSGNPGPPLELCDKDPGILSVTVWSGFPDDITLDSISLTLNATYNADDGVKALKSSTAIVLHPGRNTITLDLPPQKPGSYVLGVLTGQIGQLRFRSHSFSKVGPADSDDFMSYEKPAKPILKVFKPRALVDLDAAVSSALLINEDQWVGILVRPVNYSLKSAILHIDTGPGLEIEESNIIEMESYAGKSRYDDQVQKDGGQIRTLDSDKNFERLTLHDGKIEFPNWASDTPSILWVLVRAISDTLSTGSSSATTRRESIVDGMRTIALKLEFGAFHNQTFERTLAVHFTYPFYVRTRVTDKCNDGTLILQVILHSEVKATLTIYDAWLDLQDGFAHSGQTEGRPNSSFFPLIISPSSKAGILFSICLDKTNRDLPVAESILNIKYGISGDRTIGAHPPVMNESTGADGAKQELIFRSAITLQRPVLDPCLAVGFLPLPSDGLRVGQLVKMQWRVERLKDLNEKEVYKQHDEVLYEVNANSGNWMIAGRKRGHVSLSTKQGARIIISVLCMPLVAGYVRPPLLGLPDIDEANISCKPAGPHLVCVLPPALSSSFCIPVNS* 1255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0360 1254 Pfam Trafficking protein particle complex subunit 10, TRAPPC10 1136 1213 IPR022233 -
Apr2g0360 1254 Coils Coil 185 205 - -
Apr2g0360 1254 PANTHER EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1/TMEM1 1 1252 IPR045126 GO:0048193|GO:1990071
Apr2g0360 1254 PANTHER BNAC09G30770D PROTEIN 1 1252 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0360 K20307 - gmx:100787264 2314.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0360 2 4316655 4329260 Apr2g0360 2 4316655 4329260 ECH