Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0336 ATGGAATTAGATTATTTTTTGGATTTCGAGGACTATTTTCCTTCCATGATTGCACGCTTGGGAGCAGAAGGGTTCATTGGAGAACTTTGCCATGGGTTTCGTTTGCTCATGGATGTGAACAAGGGTCTTATCACGTTTGAGAGCTTGAAGATGAATTGTCACTTGCTGGGTTTGGATGTGAGGGATGATGAACTTGTTTGCATGCTAATGGAAGGTGATTTGGATGGAGATGGTGCTCTAAGCCAAATGGAGTTTTGCATTCTCATGTTTAGGTTGAGTCCATGTTTGATGGATGCACCTAAAATGCACACTCAAGGGTCAGATCCCATGCTAATGATGTAA 342 0.4211 MELDYFLDFEDYFPSMIARLGAEGFIGELCHGFRLLMDVNKGLITFESLKMNCHLLGLDVRDDELVCMLMEGDLDGDGALSQMEFCILMFRLSPCLMDAPKMHTQGSDPMLMM* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0336 113 SUPERFAMILY EF-hand 4 89 IPR011992 -
Apr2g0336 113 Pfam EF-hand domain pair 41 91 IPR002048 GO:0005509
Apr2g0336 113 ProSiteProfiles EF-hand calcium-binding domain profile. 60 95 IPR002048 GO:0005509
Apr2g0336 113 ProSitePatterns EF-hand calcium-binding domain. 73 85 IPR018247 -
Apr2g0336 113 Gene3D - 7 108 - -
Apr2g0336 113 PANTHER CALCIUM-BINDING PROTEIN KIC 4 105 IPR044205 GO:0005509
Apr2g0336 113 PANTHER CALCIUM-BINDING PROTEIN PBP1-LIKE 4 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0336 Apr-Chr2 4008813 4009364 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0336 9 101 EF-hand Containing Proteins AT5G54490 60.000 1.80e-34 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0336 K24345 - gmx:100794479 194.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0336 2 4008813 4009364 Apr2g0336 2 4008813 4009364 ECH