Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0331 ATGGCTACACCAAACTCCCAACCCCACTTCCAAGATTTCTTGCCTGTTATGGCCAACAAGCTTGGTGGTGATGGCCTAATAGATGAACTGTGCAATGGGTTTAATCTGTTGATGGATTCTGGTAAAGGGGTCATCACATTTGAGAGCCTCAAGAGAAATTCAGCATTGCTTGGCCTTCAGGAATTCAGTGATGAGGATCTTCACTCCATGCTTGTGGAAGGTGACTTTGATGGTGATGGGGCCCTCAATCAGTTGGAGTTTTGTGTCTTGATGTTCAGACTTAGCCCTGAACTCATGGAGGGGTCTAAGTTGTGGTTGGAGCAAGTCCTTCAACAAGAAATCCAAGATTGTTTCTAA 357 0.451 MATPNSQPHFQDFLPVMANKLGGDGLIDELCNGFNLLMDSGKGVITFESLKRNSALLGLQEFSDEDLHSMLVEGDFDGDGALNQLEFCVLMFRLSPELMEGSKLWLEQVLQQEIQDCF* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0331 118 Gene3D - 8 117 - -
Apr2g0331 118 ProSiteProfiles EF-hand calcium-binding domain profile. 62 97 IPR002048 GO:0005509
Apr2g0331 118 SUPERFAMILY EF-hand 5 91 IPR011992 -
Apr2g0331 118 PANTHER CALCIUM-BINDING PROTEIN KRP1 1 116 - -
Apr2g0331 118 Pfam EF-hand domain pair 42 93 IPR002048 GO:0005509
Apr2g0331 118 ProSitePatterns EF-hand calcium-binding domain. 75 87 IPR018247 -
Apr2g0331 118 PANTHER CALCIUM-BINDING PROTEIN KIC 1 116 IPR044205 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0331 Apr-Chr2 3955184 3957304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0331 5 113 EF-hand Containing Proteins AT4G27280 66.364 6.97e-49 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0331 K24345 - gmx:100500465 199.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0331 2 3955184 3957304 Apr2g0331 2 3955184 3957304 ECH