Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0310 ATGAAGCCACACAAACTTCCTTCCTCGACACTCTCACGTGCGTTCTCACGTGCCCTAAGCTCCGGCGCCGCCACCACCGCATCGCCGCAATGTGGATCAGTGTTTCCTTTGAAGACGGTAACCACCGCCAACTTCGAACCCTCGCTGGCGGAGCTCCGGCGCCATGTCCGGTCGTCGGACTTCGTGGCCATCGACCTCGAGATGACGGGCATCACCAGCGCTCCGTGGCGCGAGTCCTTCGAGTTCGACCGTTCCGACGTTCGCTTCCTCAAGGTCAGAGACTCTGCCAACAAGTTCGCCGTCGTTCAATTCGGCGTTTGTCCTTTCCGTTGGGATCCCTCCAATGGCTCCTTCGTCGCTTATCCGCATAATTTCTATGTTTTTCCGCGTCAGGAGCTTGCAGGTTTTGGACCATGTAATGAATTTCTCTGCCAGACAACTTCAATGGATTTCTTGGCTAAATACCAGTTTGATTTTAATGCATGCATACATGAAGGAATATCTTATTTATCCAGAGAACAAGAAAGGGAAGCATTAAGGAGTTTGAATTCTACATATGATAGTGAGTGGTCAGACATTTGTAAATTAAAAGATGTTAGGGACATGACATTGGTCAGCATGGCAGACATTTTGTTCAGTGAACGAATGAAAAACAAATTGAGTGAATGGCGTGATGGGTTATTACAAGAGCAAAATCAAGAAGATCAAATTCAAGGAATTTCAAAAGACTCAAAATTTCAAGTTATTTTCTTTAAGATGCATCCGGCTCTTAGGCTTAATGGATTCACCTCTCACCAGCTTAAATTGATTCAGTTGGTCATCAGAAAGCATTTCAAAGATCTTTCCTATGTCAGTGTGAACAGTGAGGCTTCTGGTTCACAACAAGTAGTTGTATACACAGACTCGAAGGATGAATTAAATGTACTTCTGAAGGAGGTGAAAGAGGAAAACTATAGGGCAGCAGAGATGAAGATCCAAGCTGCAGTGGGATTTCGCCATGTTATTGATCTCCTTTCATCAGAGCAGAAGTTGATAGTTGGTCACAATTGTTTTCTAGATATTGCTCATGTCTACAGCAAATTTATAGGCCCTCTTCCAGGGACTGCTGAAGAGTTTGTTGCCTCTGTTAACAAGTGCTTTCCACACATTGTTGACACCAAAATACTCTTTAACACCAATTGTATGCTCCAAGAAAGAATGAAAAGGTCCAGAAAATCACTGGCCTCTGCATTTGCTTTGTTTTGTCCACAAATTGCTTGTGGCTCCAGTAGTATTGCTCCAGGTTCACTCTTACATGTGAAAGTTGACGTTGAAGTTGATGATTCAAGATCATCCAGCTGGAACCCTGGAGGCAAGCATGAGGCTGGATACGATGCTTTCATGACTGGATGCGTCTTTGCCCAGTTATGCAGTGATTTAGGTATCGATTTTAAACTCCATGAATCTTCAAAACAATTAGCCCTCGATGAGAAACTACAGAAGTACGTTAATCGTCTTTATCTTAGTTGGATGCATGGGGACATTATTGATCTAAATACTGGTAATAAGATTGCTGATTCTTCACCGAGCTACAACCTCAAGAGGCGGTACCCTAACATTGTCTTTGACAACATTGTTATTATTTGGGGATTTCCTTCCAAGCTAAAGGCAAGTGAAATAAGACAGTGCATATCTGAAGTATTTGGACGAACTTCTGTAGTTTCTGTCTACCACTTGGATGCAACAGCAGTGTTCGTTCAGTTTAACAAGGCTGAACTAGTTTCCGATTTTCTTTTATTGAAGGACACCTTAGAGAGAAGTGATGATGCAATCTTGGTTTTGCATCCACTGGCAAAACTTATGGAAGGTGGAAATACATGCGCTGCCAGTTATGATACTTATAAAGAAATATGTGTTTCACCCATATCAGAAGGTCTGTTTGCTGATCAGGCAAAGGCTGTTGGAATAAAGTGGAAGACCAAATTGACAGAAATAGAATACAAAGTAGCATTGGAAAGCAAAGAACATGAAAGTCGAAGGGTACTAGGTAATGTAAATACAGCGGTGAAGAATGTAGAAAATACTAAGCCAAACACAATTGATCAGTTGAGTAATGCTCCATCCCGTGGGCAAGTCTCATCTTTTGAGATTGAAGATTCTCCTTGTGTTGTAGAAGCCAACATGTGA 2166 0.4252 MKPHKLPSSTLSRAFSRALSSGAATTASPQCGSVFPLKTVTTANFEPSLAELRRHVRSSDFVAIDLEMTGITSAPWRESFEFDRSDVRFLKVRDSANKFAVVQFGVCPFRWDPSNGSFVAYPHNFYVFPRQELAGFGPCNEFLCQTTSMDFLAKYQFDFNACIHEGISYLSREQEREALRSLNSTYDSEWSDICKLKDVRDMTLVSMADILFSERMKNKLSEWRDGLLQEQNQEDQIQGISKDSKFQVIFFKMHPALRLNGFTSHQLKLIQLVIRKHFKDLSYVSVNSEASGSQQVVVYTDSKDELNVLLKEVKEENYRAAEMKIQAAVGFRHVIDLLSSEQKLIVGHNCFLDIAHVYSKFIGPLPGTAEEFVASVNKCFPHIVDTKILFNTNCMLQERMKRSRKSLASAFALFCPQIACGSSSIAPGSLLHVKVDVEVDDSRSSSWNPGGKHEAGYDAFMTGCVFAQLCSDLGIDFKLHESSKQLALDEKLQKYVNRLYLSWMHGDIIDLNTGNKIADSSPSYNLKRRYPNIVFDNIVIIWGFPSKLKASEIRQCISEVFGRTSVVSVYHLDATAVFVQFNKAELVSDFLLLKDTLERSDDAILVLHPLAKLMEGGNTCAASYDTYKEICVSPISEGLFADQAKAVGIKWKTKLTEIEYKVALESKEHESRRVLGNVNTAVKNVENTKPNTIDQLSNAPSRGQVSSFEIEDSPCVVEANM* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0310 721 Pfam CAF1 family ribonuclease 40 466 IPR006941 -
Apr2g0310 721 Gene3D - 39 210 IPR036397 GO:0003676
Apr2g0310 721 Gene3D - 294 515 IPR036397 GO:0003676
Apr2g0310 721 PANTHER POLY(A)-SPECIFIC RIBONUCLEASE PNLDC1 36 652 - -
Apr2g0310 721 PANTHER POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1 36 652 - -
Apr2g0310 721 SUPERFAMILY Ribonuclease H-like 38 478 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0310 Apr-Chr2 3700297 3705194 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0310 K01148 - gmx:100784997 1179.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0310 2 3700297 3705194 Apr2g0310 2 3700297 3705194 ECH