Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0304 ATGTCAGTCTCAGCTGCTCCAGCACAACCATTGGGGGATCGATTGTGTGAAAATGGATTTGAATGTGTTAAAATTCTCCCTGCCACCAATGATGCTCATGGAGGAGTCATTGTAGACTTAAAGGAGGCTATGGACTCTGATGTTTTTGCTACTTTGCTTAGATCTTCTCTCCTACATTGGAAGCAATTGGGAAAAGATGGGGTCTGGATCAAGTTACCTATCGAGCTGGTTCATCTAGTTGAAGCTGCAGTTAAGGAGGGTTTTTGGTATCACCATGCTGAGCCAAGCTATCTAATGCTAGTTTATTGGATTCCGAAAACTGGCTGCACAATACCTCCAAATGCTTCCCATCGTGTTGCAGTTGGTGCTATTGTCTTAAATGACAAGAAAGAGGTTCTTGTAGTTCAGGAAAAAAGAGGTGGATTCCATGGGATTGGTGTCTGGAAGATACCTACTGGAGTAGTTGATGTGGGTGAGGAGATTTTTGAAGCTGCAATTAGAGAAGTAAAAGAAGAGACAGGAATTGACACAGAATTTGTGGAAATACTAGCATTCAGACACATACACAATTCATTCTTTGGAAAATCAGACCTATCTTTTGTTTGCATGCTGCGTCCTCTCTCTTTTGACATCAAAATGCAAGAACTGGAAATTGAGGCAGCTCAGTGGATGCCATTCGATGAATTTGCTGTTCAACCTTTTAATCAGATGCACGAGCCCTTCAAGTACATAATTGAACTATATTTGGCAAAGGTGGAAAAGGTCTACAATGGATTCTCTCCGCGACCTGTCTCATCATATTTTGTGGAGGAATTGAATTATCTATATTTGAATAGTCATGACCTGGACAAATCTTCCAAGCCAGCCTTGGCCATCCATAGGAGTTGA 888 0.4155 MSVSAAPAQPLGDRLCENGFECVKILPATNDAHGGVIVDLKEAMDSDVFATLLRSSLLHWKQLGKDGVWIKLPIELVHLVEAAVKEGFWYHHAEPSYLMLVYWIPKTGCTIPPNASHRVAVGAIVLNDKKEVLVVQEKRGGFHGIGVWKIPTGVVDVGEEIFEAAIREVKEETGIDTEFVEILAFRHIHNSFFGKSDLSFVCMLRPLSFDIKMQELEIEAAQWMPFDEFAVQPFNQMHEPFKYIIELYLAKVEKVYNGFSPRPVSSYFVEELNYLYLNSHDLDKSSKPALAIHRS* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0304 295 SUPERFAMILY Nudix 84 249 IPR015797 -
Apr2g0304 295 Gene3D - 15 108 - -
Apr2g0304 295 Pfam NUDIX domain 117 240 IPR000086 -
Apr2g0304 295 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 118 257 - -
Apr2g0304 295 ProSitePatterns Nudix box signature. 153 174 IPR020084 GO:0016787
Apr2g0304 295 PRINTS NUDIX hydrolase family signature 148 162 IPR020476 -
Apr2g0304 295 PRINTS NUDIX hydrolase family signature 162 177 IPR020476 -
Apr2g0304 295 PANTHER NUDIX HYDROLASE RELATED 20 285 IPR003293 -
Apr2g0304 295 Pfam Nudix hydrolase domain 26 104 IPR040618 -
Apr2g0304 295 PANTHER NUDIX HYDROLASE 2 20 285 - -
Apr2g0304 295 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 76 94 IPR003293 -
Apr2g0304 295 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 114 132 IPR003293 -
Apr2g0304 295 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 174 197 IPR003293 -
Apr2g0304 295 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 202 226 IPR003293 -
Apr2g0304 295 CDD Nudix_Hydrolase_12 117 244 - -
Apr2g0304 295 ProSiteProfiles Nudix hydrolase domain profile. 116 248 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0304 Apr-Chr2 3633737 3638678 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0304 - - gmx:100783941 526.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0304 2 3633737 3638678 Apr2g0304 2 3633737 3638678 ECH