Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0302 ATGAACCCGCTCCGGCCAGCCACACTGGCAGCGCTCGCGGCGGCGCTCCTCCTCCTCCTCACCCACACGCGCGCGCACAACATCACGCGCATTCTGGCGAAGCACCCGGAGTTCTCCACCTTCAACCACTACCTAACCCTAACACACCTAGCGGCAGAGGTCAACCGCAGAACCACCATCACCGTCTGCGCCGTTGACAATGCCGCCATGAACGACCTCCTCTCGAAGCACCCTTCCATCTACACCATCAAAAACATCCTCTCTCTTCACGTCCTCCTCGACTACTTCGGCGCCAAAAAACTCCACCAAATCACTAACGGCACCGCGCTTGCCGCCACAATGTACCAAGCCACCGGCACTGCGCAGGGATCCTCCGGCTTCGTCAACATCACCGACCTCCGCGGTGGCAAAGTCGGCTTCGGCGCCGAAAACAACGGCGGAACACTCTCCGCAAACTTCGTCAAATCCGTCGAAGAAATTCCTTACAACATTTCCGTTATTCAGATCAGCAAAATCCTTCCCTCGGCCTCAGCGGAAGCTCCTACACCCGCACCTAGCCAACAAAACCTCACCGCTATTATGTCCAAACACGGTTGCAAAGTCTTCGCCGACACGTTATCTTCTTTCCCCGACGCTCTCTCGACCTTCAACGACAACCTCGACGGTGGATTAACTGTTTTCTGCCCCGTCGATGACGCGTTCAAATCGTTCCTTCCAAAGTTCAAAAACCTAACCGCTTCCGGTAAGGTCTCGATCCTCGAATTCCACGGCGTACCGGTGTACCAGTCCATTGCAATGCTCAAATCCAACAACGGATTGCAGAACACTCTCGCCACCGATGGCGCTAACAAATTCGATTTCACCATTCAAAATGACGGCGAACAGGTCACGCTTAGGACCAAATCTACCACTGCGAAGATCACCGACACGCTCATTGATGAACAGCCTCTCGCGATCTTCGCCATTAACAAGGTGCTTCTTCCGAAGGAGTTGTTTAAGGCTGAGGCTCCCGCACCTGCTCCGGCGCCGGAGCCTGCAGCCGCCGACGCTCCCTCGCCGGCCAAGAAGAAGACAAAGAAGAAGGCTGCTGATGCGCCTGCCGCGGATGCGAGCTCTGACGCGCCCGCTGACTCGCCGGATGGTGCCGCCGATGATACCGCCGACGACAGTAACGGCGCCGTTAAACCTAACGGCGCCAGGTACGTTAACTTTATCGTGGCTTTGGCCTTGGTTTTTGGTTTGCCGTTACTGATGTGA 1257 0.5617 MNPLRPATLAALAAALLLLLTHTRAHNITRILAKHPEFSTFNHYLTLTHLAAEVNRRTTITVCAVDNAAMNDLLSKHPSIYTIKNILSLHVLLDYFGAKKLHQITNGTALAATMYQATGTAQGSSGFVNITDLRGGKVGFGAENNGGTLSANFVKSVEEIPYNISVIQISKILPSASAEAPTPAPSQQNLTAIMSKHGCKVFADTLSSFPDALSTFNDNLDGGLTVFCPVDDAFKSFLPKFKNLTASGKVSILEFHGVPVYQSIAMLKSNNGLQNTLATDGANKFDFTIQNDGEQVTLRTKSTTAKITDTLIDEQPLAIFAINKVLLPKELFKAEAPAPAPAPEPAAADAPSPAKKKTKKKAADAPAADASSDAPADSPDGAADDTADDSNGAVKPNGARYVNFIVALALVFGLPLLM* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0302 418 Pfam Fasciclin domain 202 328 IPR000782 -
Apr2g0302 418 Pfam Fasciclin domain 36 131 IPR000782 -
Apr2g0302 418 Gene3D FAS1 domain 23 174 IPR036378 -
Apr2g0302 418 Gene3D FAS1 domain 186 329 IPR036378 -
Apr2g0302 418 ProSiteProfiles FAS1/BIgH3 domain profile. 25 173 IPR000782 -
Apr2g0302 418 SUPERFAMILY FAS1 domain 182 329 IPR036378 -
Apr2g0302 418 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 8 401 - -
Apr2g0302 418 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 8 401 IPR033254 -
Apr2g0302 418 MobiDBLite consensus disorder prediction 337 393 - -
Apr2g0302 418 SMART fasc_3 225 329 IPR000782 -
Apr2g0302 418 SMART fasc_3 61 176 IPR000782 -
Apr2g0302 418 ProSiteProfiles FAS1/BIgH3 domain profile. 186 326 IPR000782 -
Apr2g0302 418 SUPERFAMILY FAS1 domain 31 173 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0302 Apr-Chr2 3628809 3630146 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0302 - - gmx:100810878 574.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0302 2 3628809 3630146 Apr2g0302 2 3628809 3630146 ECH