Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0274 ATGCACCATGTAGCTGAGTTTTTCCTTCAACCCTTTTTCACACGTGGGGTGTCTGCTTCACTACACCTAGTGTTGTTACTGGTGTTTCTTGTGTTTTGGATATGGAAGAAAGTCCGAGTGGATCATAGAGGAAAGAATGAAAGAAATGAATTCCATAGTACTGGTTTCTTGTACTATAAACACAGTTTGGTTTCTGGCGTAGTTATTTGTGTACTCAACCTTGTTTTGTGCATAGTAACCTACTTTTATTTGTATAATAAACATCATGGTTTACAGGAGTTTGTCACAGTTTCTGGTTTGGCTCTCAGAACAGTTGTTTGGGGTGTTGTTTGTGCTTATTTGCATTCTAAAAGGTTCAAAGCACATGAACCGAGTTTCCCATGTTTGTTGAAAATTTGGAGCTGGGTTTTTGCCTTTGTTTCTTGTTGTTGCCTTGTTATAGACTTTGTTGTCTATGGGAACCATATTTTCTTGCCAATTATATTCCTTGTTTCTGACACTGGTTCCATTTTTATGGGTTTTTTTCTATGTTATGTGGCATTTTCTGTTAACAATGTGACTAAACTTGCCCCACTTGAAGAGACCCTTTTGAATGGTGACTCCAGTGTAAGCAACAATTGTGCTCCCAATAAGACTAGTGGAAATGAAAATTTAACCCTTTATTCAAATGCTGGATTTTTCAGCATGCTCACTTTCTCTTGGGTTAGTCCATTAATAACTCTAGGCAATGAGAAGACTTTAGACCATGAGGACCTTCCACTGCTAGCTACTGATGATAGTGCTTATGGGACTTTCCCAACTTTTAGAAACAAACTTGAGTCAGAGTGTGGTAGTGTTAGGAGAGTGACCACTTTTAAGCTGGTGAAGGTGTTATTCTTGTCAACATGGCAAGGGGTTCTCTTATCAGGTTTATTTGCATTCTTATACACATTTGCTTCTTATGTTGGACCCTATCTTATTGACATCCTTGTTCAATACATCAATGGGGAAGAAAAATTTAAAAATGAAGGATATGTTTTGACTGTAGCATTTGTCGCTGCAAAGATTGTGGAGATGCAATCAATGTTGGTGGCAATGATCTATGCTAAAGGTTTGACTCTTTCATGTCAATGGAAGGAGGGTCGCAGTAGTGGTGAAATCATCAACCTATTGACTGTTGATGCTGCAAGGATTGGTGAATTTTGTTGGTACATGCATGATCCATGGATGTGTGTTCTGCAAGTTTCTTTGGCCTTGTTAATTCTATATAGGAGTGTAGGGGTTGCTTCAATAGCTGCTCTTGCTGCCACTGTAATTGTGATGTTATTAAACCTTCCTGTGTCATCATTGCAAGAAAAGTTCCAAAGTAAGGTAATGGAGTTCAAAGATAAAAGAATGAAGGCAACATCTGAGATTCTAAAGAGCATGAGGATTCTAAAATTGCAGGCATGGGAGATGAAGTTCTTATCAAAGATTATTGAGCTTAGGAAGACTGAGGAGACATGGCTAAAAAAATTTCTAGTTGGCACAGCAGTTATTAGATTTCTCTTCCATAATGCGCCAACTTTTATTGCTGTGGTTACTTTCGGTACTTGTGTTCTTGTTGGAATCCCACTTGAATCAGGCAAGGTCTTATCAGCACTTGCAACATTCAGAATTCTTCAAATGCCCATCTATAGTCTTCCTGACACAATTTCAATGATTACACAAACTAAGGTTTCCCTTGATAGGATAGTATCATTTCTTCGTCTAGATGACTTGCAGACTGATGTAGTAGAGAAACTTCCACCAGGTAGTTCTGATATAGCAATTGAAGTAGTAGATGGAAATTTCTCTTGGGATATATCTTCTCCTAATACAACATTGAAAAATATAAATCTCACAGTTTTTCATGGTATGAGGGTTGCTGTTTGTGGTACTGTTGGATCAGGCAAGTCTAGTTTACTTTCTTGTATAATAGGTGAAGTACCAAAGATATCTGGGACACTGAAGGTGTGTGGAACAAAGGCTTATGTTGCTCAATCGCCATGGATACAGAGTGGAAAGATAGAAGACAACATATTATTTGGTAAAGAGATGGACAGGGAAAAGTATGAGAAGGTGCTAGAAGCATGTTCCTTGACAAAAGACCTTGAGATTCTACCGTTTGGTGATCAGACAATTATTGGAGAGAAGGGAATCAATTTGAGTGGTGGACAGAAGCAAAGAGTACAAATAGCCCGTGCTCTATACCAAGATGCTGACATATATCTGTTTGATGATCCCTTCAGTGCTGTGGATGCTCATACAGGATCACATCTTTTTAAGGAATGCTTGCTAGGCCTTTTAAAATCAAAAACTGTGATATACATCACTCATCAAGTAGAGTTCTTACCTGATGCTGATCTAATATTGGTCATGAGAGAAGGAAGGATTACTCAATCAGGAAAATACAATGACATTCTCAGGGCAGGGACTGATTTTATGGAACTTGTAGGTGCACATAGAGAAGCTTTGTCTTCAATTAAGTCCTTAGAAAGAAAACCAACATTTAAAACATCAAGTATCTCCAAGGATGACACAAATTTGCTAAGTGATTTTGAACTTGAGAACAATGTGGAAAACATAGATGATCAAGGTGACAAGTCAGATGATGCAGTTGAGCCCAAAGGCCAACTTGTTAAAGAAGAAGAACGCGAAACAGGTCGAGTTGGGTTTAGAGTCTACTGGAAATACATAACATCAGCTTATGGGGGAGCTCTTTTACCCTTCATATTACTTTCACAGACACTCACTGTGTTTTTTCAGATAGCAAGCAATTATTGGATGACTTTGGCAACTCCTGTTTCAGAAACAGCAGAACCTGATATTGACAGTGTTACACTTATGGTTGTCTATGTTGCTTTGGCAAGTGGAAGTTCCATTTTCACCCTCTTCAGAGCATTTCTTGCTGTATTAGCTGGATACAAGACAGCCACTACACTCTTCAATAAAATGCATTTCTGCTTTATTCGAGCACCAATATCTTTTTTTGATGCCACCCCAAGTGGGCGAATCCTTAACAGAGCTTCAACAGATCAAAGCACACTAGATATGAGCATTGGAAATCTATTTTGGGGAGTTACCTTCAATGTAGTTCAACTCTTTGGAAATATTGTGGTGATGTCTCAAGCCACATGGCAGGTGTTAATAGTATTGATTCCTGTCATGGCAGCATGTATATGGTACCAGCGATATTATTCTGCATCAGCAAGGGAATTGGCACGATTAGTTGGTACATGCCAAGCTCCAGTTATACAACATTTTTCTGAAACAATTTCTGGAGCAACAACCATAAGAAGTTTTGAGCAAGAATCAAGGTTTAATGACATAAATATGAAATTGATAGACAGATATTCCCAACCCAAATTGTACAGTAGTACTGCAATAGAGTGGCTGTGTTTCAGATTGGATTTTTTGTCCACTTTAACATTTGCCTGCTGTTTGGTTTTCTTGATTTCTTTTCCAAATTCAATTACTACTCCTGGCATTGCGGGGTTGGCTGTGACATATGGACTAAATCTAAACTCAATACAATTTAAAATAATCTGGTTTCTTTGCAATGTGGAGAACAAAATTATATCTGTTGAAAGAATACTCCAATACACCTCCATCCCAAGTGAAGCTTCTCTTGTAATAAAAGACCATCAACCAGATCATTCATGGCCATCATTTGGAGAGGTTCATATTCAGGATTTACAGGTTCGATATGCTCCTCACTTGCCTCTTGTTTTACGCGGTCTTACTTGCACTTTTACTGCTGGAGCAAAAACTGGTATTGTGGGAAGAACAGGAAGTGGAAAATCAACTCTAGTTCAAACACTATTCCGGCTCATTGAACCTGTTGCTGGACAATTATTGATAGATAGCATCAACATCTCTTTGATTGGAATTCATGATTTGCGGTCTAGACTAAGCATTATTCCTCAGGATCCAACAATGTTTGAAGGGACTGTAAGAAGCAACCTGGACCCACTGGAAGAGTACACAGATGAACAGATTTGGGAGGCCTTAGATATGTGCCAACTTGGAGAGGAAGTAAGGAAAAAAGAAGGGAAGCTTGATTCCATGGTTACTGAGAATGGAGAAAATTGGAGTATGGGTCAAAGGCAGTTAGTCTGCCTTGGCCGCGTTCTACTGAAGAAAAGCAAGATCTTGATTCTAGATGAAGCTACTGCATCAGTTGATGCAGCCACAGATAATATTATTCAGCAAACAGTTAAGCAACATTTCTCAGGATGCACAGTCATTACCATTGCTCATAGGATAACTTCAATCCTTGATAGTGACATGGTTCTGTTCCTAAATCAAGGGCTTATTGAGGAATATGATTCACCAAAGAAACTGCTTAAGAATAAATCTTCATCTCTTGCTCATTTAGTCGCAGAATACACAAGGAGATCAAACTCTGGTTTTGGAAATTGA 4422 0.386 MHHVAEFFLQPFFTRGVSASLHLVLLLVFLVFWIWKKVRVDHRGKNERNEFHSTGFLYYKHSLVSGVVICVLNLVLCIVTYFYLYNKHHGLQEFVTVSGLALRTVVWGVVCAYLHSKRFKAHEPSFPCLLKIWSWVFAFVSCCCLVIDFVVYGNHIFLPIIFLVSDTGSIFMGFFLCYVAFSVNNVTKLAPLEETLLNGDSSVSNNCAPNKTSGNENLTLYSNAGFFSMLTFSWVSPLITLGNEKTLDHEDLPLLATDDSAYGTFPTFRNKLESECGSVRRVTTFKLVKVLFLSTWQGVLLSGLFAFLYTFASYVGPYLIDILVQYINGEEKFKNEGYVLTVAFVAAKIVEMQSMLVAMIYAKGLTLSCQWKEGRSSGEIINLLTVDAARIGEFCWYMHDPWMCVLQVSLALLILYRSVGVASIAALAATVIVMLLNLPVSSLQEKFQSKVMEFKDKRMKATSEILKSMRILKLQAWEMKFLSKIIELRKTEETWLKKFLVGTAVIRFLFHNAPTFIAVVTFGTCVLVGIPLESGKVLSALATFRILQMPIYSLPDTISMITQTKVSLDRIVSFLRLDDLQTDVVEKLPPGSSDIAIEVVDGNFSWDISSPNTTLKNINLTVFHGMRVAVCGTVGSGKSSLLSCIIGEVPKISGTLKVCGTKAYVAQSPWIQSGKIEDNILFGKEMDREKYEKVLEACSLTKDLEILPFGDQTIIGEKGINLSGGQKQRVQIARALYQDADIYLFDDPFSAVDAHTGSHLFKECLLGLLKSKTVIYITHQVEFLPDADLILVMREGRITQSGKYNDILRAGTDFMELVGAHREALSSIKSLERKPTFKTSSISKDDTNLLSDFELENNVENIDDQGDKSDDAVEPKGQLVKEEERETGRVGFRVYWKYITSAYGGALLPFILLSQTLTVFFQIASNYWMTLATPVSETAEPDIDSVTLMVVYVALASGSSIFTLFRAFLAVLAGYKTATTLFNKMHFCFIRAPISFFDATPSGRILNRASTDQSTLDMSIGNLFWGVTFNVVQLFGNIVVMSQATWQVLIVLIPVMAACIWYQRYYSASARELARLVGTCQAPVIQHFSETISGATTIRSFEQESRFNDINMKLIDRYSQPKLYSSTAIEWLCFRLDFLSTLTFACCLVFLISFPNSITTPGIAGLAVTYGLNLNSIQFKIIWFLCNVENKIISVERILQYTSIPSEASLVIKDHQPDHSWPSFGEVHIQDLQVRYAPHLPLVLRGLTCTFTAGAKTGIVGRTGSGKSTLVQTLFRLIEPVAGQLLIDSINISLIGIHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEYTDEQIWEALDMCQLGEEVRKKEGKLDSMVTENGENWSMGQRQLVCLGRVLLKKSKILILDEATASVDAATDNIIQQTVKQHFSGCTVITIAHRITSILDSDMVLFLNQGLIEEYDSPKKLLKNKSSSLAHLVAEYTRRSNSGFGN* 1474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0274 1473 CDD ABC_6TM_ABCC_D1 301 571 IPR044746 GO:0140359
Apr2g0274 1473 Pfam ABC transporter transmembrane region 356 550 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr2g0274 1473 Pfam ABC transporter transmembrane region 910 1153 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr2g0274 1473 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 597 820 IPR003439 GO:0005524
Apr2g0274 1473 CDD ABCC_MRP_domain2 1225 1445 - -
Apr2g0274 1473 ProSitePatterns ABC transporters family signature. 722 736 IPR017871 GO:0005524
Apr2g0274 1473 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 190 1473 - -
Apr2g0274 1473 Gene3D ABC transporter type 1, transmembrane domain 872 1208 IPR036640 GO:0005524|GO:0016021
Apr2g0274 1473 Gene3D ABC transporter type 1, transmembrane domain 271 579 IPR036640 GO:0005524|GO:0016021
Apr2g0274 1473 SUPERFAMILY ABC transporter transmembrane region 296 576 IPR036640 GO:0005524|GO:0016021
Apr2g0274 1473 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1227 1461 IPR003439 GO:0005524
Apr2g0274 1473 Gene3D - 1210 1463 IPR027417 -
Apr2g0274 1473 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 910 1190 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr2g0274 1473 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 594 819 IPR027417 -
Apr2g0274 1473 Pfam ABC transporter 1245 1392 IPR003439 GO:0005524
Apr2g0274 1473 Pfam ABC transporter 615 749 IPR003439 GO:0005524
Apr2g0274 1473 Gene3D - 580 841 IPR027417 -
Apr2g0274 1473 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 300 563 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr2g0274 1473 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1219 1453 IPR027417 -
Apr2g0274 1473 CDD ABC_6TM_ABCC_D2 908 1202 IPR044726 GO:0140359
Apr2g0274 1473 SUPERFAMILY ABC transporter transmembrane region 907 1207 IPR036640 GO:0005524|GO:0016021
Apr2g0274 1473 SMART AAA_5 1253 1438 IPR003593 -
Apr2g0274 1473 SMART AAA_5 624 797 IPR003593 -
Apr2g0274 1473 CDD ABCC_MRP_domain1 597 797 - -
Apr2g0274 1473 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 190 1473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0274 Apr-Chr2 3332954 3339218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0274 576 813 Calmodulin-binding Proteins AT2G36910 29.020 1.42e-22 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0274 - K05666 gmx:106794105 2413.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0274 2 3332954 3339218 Apr2g0274 2 3332954 3339218 ECH