Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0266 ATGGCATCAAGTCAGAACCTGAAAGAACTACAATGGGCTTTGCAAGCAATCAAATCTGAGGGCCTAAATCTGCACAGCATTTCCTTCTACCTTTCCCAAACAACTTCAGGTTGTTACCAAGAAACAGACAACTCCATAAGCATAAACATTTCCAAGGAAAATCTTCCATTCTTTTCCCACCTCTTGACAACACTAGCAGCACCAAAGAACACCAAAACCACTTTGAGAAACTTGGAGTTCCACAGAGTTGAATGGGATTCAACACAGGTAAAAAATCTTGGTATCTTGCTAGGGAATAACCAAAATATAGAGCAAGTTGTTTTTAGAAGAAACAGATTCAATGGAAAAAGTTTATCTGATCTTTCTGACATTCTGAAGGCAAATAAAGTGATCAGAGAGATTATGCTTTCAGAGTCAAGAATTGGATCAGTTGGAGCTGGACTCATTGCTTCTGCTCTTATGATTAATAATAGTTTGGAGGAGTTGCAAATATGGGAAGATTCAATAGGGTCAAGAGGTGCTGAGGAGCTTTCGAAGATGATTGAGGTCAACTCAACTCTTAAACTGTTGACAATTTTTGACTCAAATGCCATCACAGCCACCCCTCTTATATCTGCAGTTTTGGCAAGGAATAGGAGTATGGAAGTTCATGTTTGGAGTGGAGAAAATGGGGAGAGAAGTTCCAAGGTGGTTGAGTTTGTACCTGAGAACAACACACTTAGAATTTACAAGCTTAACCTCTCAGGTACTTGCAGGGTTACTTGCTCATTAGGAATGAACTTCACGGTAAAGTCACTTGACATGACTGGAGTCAAGCTAAAGTCACGGTGTGCTAAGGAATTTAGATGGGTTTTAGAACAAAACCAGACCCTCAAAGAGGTCAATTTGTCAAGAACATGCCTTAAAGACAAGGGCATTGTGTATGTTGCAGCTGGACTCTTTAAGAACCATAGTCTGCAAACTTTACATCTAACAGGAAATTGGTTTAGTGGAATAGGTGTGGAGCATCTACTATGCCCTTTGAGTAGATTTTCAGCACTGCAAATGCAAGCCAACACTACTTTGAAGTGTGTTACTTTTGGAGGAGGAAGAACAAGAATAAAAAGGGATGGTCTATCTGCTATTATACAGTTTCTTATAACCAATGAGACAGTGAGGCAGTTAGGAATTCATGATGATGAGAGTTTGAGATCAGATGACTTTGTTAAAATCTTCAAGAGTTTGGAGAAGAATGCTAGCTTGAAAAGTTTCTCTCTACAAGGCTGCAAAGGTGTTCAGGGAGAGACATTGCTGCAGACAATTATGGAGACACTGCAGATTAATCCTTGGATTGAAGACATTGATCTCTCCAGAACACCTTTACATAACTCTGGAAAGACCCAGGGAATTTATCAAAGATTGGGCCAGAATGAGAAGAGTGAACCAGAAATGGATTTGCTCAAGGACATGCCACTAACTGAGCCTAAGAGTTGCAGAGTTTTCTTCTGTGGTCAAGAATGTGCAGGCAAATCCACACTTTGTCATTCAATATCACAAAACTTCTCTGCTTCGGCAGTTCCCTACTTGGATCAAGTCAGAACAATAGTGAACCCAGTGGAGCAGGTTGTAAAAACAGCGGGAATGAAGATTAAAACTTTCAAGGATGAGGATACAAAGATTTCAATATGGAATCTTGCTGGTCAGCATGAGTTTTTCTCCCTCCATGATCTCATGTTCCCAGGGCACGGGAGTGCATCATTTTTCATCATCATATCAAGTTTATTCAGGAAACCAAGTAACAAAGAACCAAAAAGCACAGCAGAAATTGAAGAGGACCTGCAATATTGGCTCAGGTTCATAGTTTCCAACTCCAAAAGAGCAGTACAACAATGCATGCTACCAAGTGTAGCTGTTGTTCTCACACACTTTGACAAAATCAACCAACCATCACAAAATTTGCAGCACACAGTAGATTCAATCCAGAGACTGAGAGACAAGTTCCAAGGCTTTGTTGATTTCTACCCAACTGTATTCACAGTTGATGCAAGATCATCAGCATCAGTTGGTAAACTCACTCATCATATCCGAAAGACAAGCAAGACAATTCTCCAAAGAGTGCCACGGGTTTATCAACTTTGCAATGATCTAATACAGATGTTATCAGACTGGAGGTCAGAGAACCACAACAAGCCAGCAATGAAGTGGAAGGAGTTTGGTGAGCTATGCCAAGTAAAAGTCCCACTTTTGAGAATTCGATCAAGACATGATAACAAAGAGAAGGTGGAAATGAGGAGAAGAGCTGTTGCAACTTGTCTTCATCACATTGGTGAGGTGATATATTTTGATGAGTTGGGGTTTCTAATTTTAGATTGTGAGTGGTTCTGTGGTGAGGCACTTGGTCAGCTCATAAAATTGAATGTTAGAAAGCAACACGCCTCAGAAAACCATGGATTTATTAGCAGAAAGGAACTGGAAAAAATCTTGAGAGGAAGTTTGCAAAGCCCTATTCCTGGTATGGGTTCAAAGGTGTTTGAGAACTTAGATGCTAGTGACCTTGTGAGGATGATGCTAAAACTTGAACTTTGTTATGAGCAAGATCCATCAGATCCAAATTCTCTACTATTGATTCCCTCCATTCTTGAAGAAGGAAGAGGAAAGCCTCAGAGGTGGCAGCTAAGCACACCAGATTGCGTTTACGCAGGACGTCATCTTGAATGTGATGATTCAAGCCACATGTTTCTAACTCCAGGATTCTTCCCTCGTTTACAGGTGCACCTTCACAACAGAATAAAGGCTCTACAGAATCAACATGGTGCAACTTACAGTCTTGAGAAGTATCTTATTACAATCAGCATCAATGGAATCTATGTAAGAGTAGAACTTGGAGGACAGTTGGGTTACTACATTGATATCCTTGCATGCTCCACCAAAAACTTGACAGAAACTTTAAGAGTCATTCATCAACTTATAATCCCTGCAATCCAAAGCGTTTGCAATGGGATCACCTTGACTGAGAATGTCATTAGACCTGAGTGTGTGAGAAATTTGACACCCCCTAGATACAGAAGAACTCAATTTGCTTCCCTGCAGCAACTGAAACAAGCACTACTTTCACTACCAGCAGATGGCATGTATGACTATCAACACACATGGAGTCCAGTCCTAGAGTCTGGTAGGCCTATTCTCCACGATGGATTTGATTTTGCACGAGACCTTTTATCAGATGATGACTTCCGTGAAGTGCTGCATCGAAGGTATCATGACCTGCACAATCTTGCTCAAGAGCTGCATGTTCCACCTGAAAATAACCCTGAAGGGCAAGGTCAATCTATAACCTTAAGTGATGAAGCTGAAAAGGTTGAACCAAGCTTTGGTGGCATTGCAAAAGGGGTTGAAGCAGTTTTACAGAGACTCAAGATAATTGAACAAGAAATCAGAGACTTGAAACAGGAAATCCAGGGGCTGAGGTATTATGAACACAGACTCCTCCTTGAGCTTCATCGCAAAGTGAACCACCTAGCAACCTTCAATGTCCAGGTGGAGGAGAGGAAAGTCCCCAACATGTTCTATTTTGTAAAGACAGAAAACTACACGAGGAGACTAGTCACTGCCATGCTTTCCGGCATGACTGCTCTCCGGCTTCACATGTTATGTGAGTTCCGGGGACAAATGCATGTTGTTGAAGATCAAATGGGTTGCGAAATCATGCAAGTTGATAACGTCGCCGTGAAGTCCTTGGCTCCATACATGAAGAAATTCATGACATTGGTAACTTTAGCTCTTAAAATAGGAGCTCATCTTGCAGCTGGGATGGGGGAAATGATACCAGACTTGAGCAAGGAAGTGGCTCATTTGGCTGGCTCTTCACTTCTCTACGGTGCAGCTGGGGCAACTGCAGCGGGGGTTGCAGGGGCTGCTGCCATGGGTCGTAGAAACAGGTCCATGGAAGGTTCAAGGGACATTCAACAAGACCTAAGAGCAGCACAGCAATGGGTTGTTGATTTCTTAAGGGAAAGGAGGTGCTCCTCCGGGAAAGATATTGCAGACAAGTTTGGACTTTGGAGAGTAAGGTACAGGGACAATGGTCAAATTGCATGGATCTGTAAGAGGCATATTTATGCCAGATCTGCAGAAATAATTGAAGTGCCAGTTTGA 4134 0.4185 MASSQNLKELQWALQAIKSEGLNLHSISFYLSQTTSGCYQETDNSISINISKENLPFFSHLLTTLAAPKNTKTTLRNLEFHRVEWDSTQVKNLGILLGNNQNIEQVVFRRNRFNGKSLSDLSDILKANKVIREIMLSESRIGSVGAGLIASALMINNSLEELQIWEDSIGSRGAEELSKMIEVNSTLKLLTIFDSNAITATPLISAVLARNRSMEVHVWSGENGERSSKVVEFVPENNTLRIYKLNLSGTCRVTCSLGMNFTVKSLDMTGVKLKSRCAKEFRWVLEQNQTLKEVNLSRTCLKDKGIVYVAAGLFKNHSLQTLHLTGNWFSGIGVEHLLCPLSRFSALQMQANTTLKCVTFGGGRTRIKRDGLSAIIQFLITNETVRQLGIHDDESLRSDDFVKIFKSLEKNASLKSFSLQGCKGVQGETLLQTIMETLQINPWIEDIDLSRTPLHNSGKTQGIYQRLGQNEKSEPEMDLLKDMPLTEPKSCRVFFCGQECAGKSTLCHSISQNFSASAVPYLDQVRTIVNPVEQVVKTAGMKIKTFKDEDTKISIWNLAGQHEFFSLHDLMFPGHGSASFFIIISSLFRKPSNKEPKSTAEIEEDLQYWLRFIVSNSKRAVQQCMLPSVAVVLTHFDKINQPSQNLQHTVDSIQRLRDKFQGFVDFYPTVFTVDARSSASVGKLTHHIRKTSKTILQRVPRVYQLCNDLIQMLSDWRSENHNKPAMKWKEFGELCQVKVPLLRIRSRHDNKEKVEMRRRAVATCLHHIGEVIYFDELGFLILDCEWFCGEALGQLIKLNVRKQHASENHGFISRKELEKILRGSLQSPIPGMGSKVFENLDASDLVRMMLKLELCYEQDPSDPNSLLLIPSILEEGRGKPQRWQLSTPDCVYAGRHLECDDSSHMFLTPGFFPRLQVHLHNRIKALQNQHGATYSLEKYLITISINGIYVRVELGGQLGYYIDILACSTKNLTETLRVIHQLIIPAIQSVCNGITLTENVIRPECVRNLTPPRYRRTQFASLQQLKQALLSLPADGMYDYQHTWSPVLESGRPILHDGFDFARDLLSDDDFREVLHRRYHDLHNLAQELHVPPENNPEGQGQSITLSDEAEKVEPSFGGIAKGVEAVLQRLKIIEQEIRDLKQEIQGLRYYEHRLLLELHRKVNHLATFNVQVEERKVPNMFYFVKTENYTRRLVTAMLSGMTALRLHMLCEFRGQMHVVEDQMGCEIMQVDNVAVKSLAPYMKKFMTLVTLALKIGAHLAAGMGEMIPDLSKEVAHLAGSSLLYGAAGATAAGVAGAAAMGRRNRSMEGSRDIQQDLRAAQQWVVDFLRERRCSSGKDIADKFGLWRVRYRDNGQIAWICKRHIYARSAEIIEVPV* 1378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0266 1377 Gene3D - 490 694 IPR027417 -
Apr2g0266 1377 SUPERFAMILY RNI-like 69 458 - -
Apr2g0266 1377 Coils Coil 1124 1151 - -
Apr2g0266 1377 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 477 679 IPR027417 -
Apr2g0266 1377 Pfam Leucine Rich repeat 287 308 IPR001611 GO:0005515
Apr2g0266 1377 Pfam Leucine Rich repeat 315 337 IPR001611 GO:0005515
Apr2g0266 1377 Pfam Ras of Complex, Roc, domain of DAPkinase 492 618 - -
Apr2g0266 1377 SMART LRR_RI_2 316 343 - -
Apr2g0266 1377 SMART LRR_RI_2 156 183 - -
Apr2g0266 1377 SMART LRR_RI_2 288 315 - -
Apr2g0266 1377 SMART LRR_RI_2 128 155 - -
Apr2g0266 1377 Pfam C-terminal of Roc, COR, domain 755 924 IPR032171 -
Apr2g0266 1377 Gene3D Ribonuclease Inhibitor 223 347 IPR032675 -
Apr2g0266 1377 Gene3D Ribonuclease Inhibitor 51 217 IPR032675 -
Apr2g0266 1377 Gene3D Ribonuclease Inhibitor 348 477 IPR032675 -
Apr2g0266 1377 PANTHER PROTEIN TORNADO 1 1 1366 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0266 - - gmx:100817598 2468.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0266 2 3235520 3240396 Apr2g0266 2 3235520 3240396 ECH