Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0247 ATGGCACATACTTGTAGCAATTTTTTGGTGAAATGGCTAGTAACAGCATTGCTCATTGCCTTGTTGAGTGGTGCCAAAGGTGCTGCTATATGTAATATAGAGTCAACTAAGTTAAGCTTATGTTATGCAGCAGTTACTGGGAAATACCCTCCAAAACCCACTGAAAAGTGCTGTGCAGTTATTAGACATGCCAATTTGCCTTGCCTTTGCAGATACAAGTCTGTCTTACCTGCTGTTGGAATCAATCCCACAAATGCTTTGGCCTTGCCCAGTAGATGTGGTCTGAAGAAAACACCACCTGAATGTAGAGTGACTTGA 318 0.4214 MAHTCSNFLVKWLVTALLIALLSGAKGAAICNIESTKLSLCYAAVTGKYPPKPTEKCCAVIRHANLPCLCRYKSVLPAVGINPTNALALPSRCGLKKTPPECRVT* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0247 105 PANTHER LIPID TRANSFER PROTEIN 1 103 - -
Apr2g0247 105 Pfam Probable lipid transfer 25 102 IPR016140 -
Apr2g0247 105 Gene3D - 28 102 IPR036312 -
Apr2g0247 105 PANTHER LIPID BINDING PROTEIN-RELATED 1 103 IPR039265 GO:0005504|GO:0009627
Apr2g0247 105 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 31 101 IPR036312 -
Apr2g0247 105 CDD nsLTP_like 31 102 IPR044741 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0247 Apr-Chr2 3061222 3061643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0247 1 103 Acyl Lipid Metabolism Gene Families AT5G55410 33.019 2.01e-21 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0247 - - gmx:100812796 166.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0247 2 3061222 3061643 Apr2g0247 2 3061222 3061643 ECH