Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0179 ATGGCGTCGTGGTGTGCTGCAAGGACTCTTCACATTCCGGCGGTGAACGTCGGCGTTCTTCGCCGCCGGGCATCGTGGGCCGCCGGAATAGGCGGAGCAGTGGTAGCCGGAAATGCACTTTTGCGTTCGACTTCGTCTAAGCGCTCAGTGCCATTCGCTTGCATGAGCCTCTCCACCGATACCCCGATCAAGGAAGCTGTTCAAACTGAAAAGGCCCCAGCAGCATTGGGGCCATATTCTCAAGCAATCAAAGCCAACAACCTTCTTTTTGTGTCAGGTGTTCTTGGCCTTGTTCCTGAGACAGGGAAGTTCATCTCTGATAATGTTGAAGATCAGACAGAGCAGGTTCTAAAAAATATGGGGGAGATCCTGAAGTCTGGGGGTGCCAGCTACTCATCAGTTGTTAAGACAACAATTTTGTTGGCTGACTTGAAGGACTTCACGAAAGTTAATGAGATCTATGCTAAATACTTCCCTTTACCTGCCCCCGCTCGTGCAACATATCAAGTAGCTGCCTTGCCATTAGATGCAAAGATTGAAATTGAGTGCATAGCAGCACTATGA 564 0.4965 MASWCAARTLHIPAVNVGVLRRRASWAAGIGGAVVAGNALLRSTSSKRSVPFACMSLSTDTPIKEAVQTEKAPAALGPYSQAIKANNLLFVSGVLGLVPETGKFISDNVEDQTEQVLKNMGEILKSGGASYSSVVKTTILLADLKDFTKVNEIYAKYFPLPAPARATYQVAALPLDAKIEIECIAAL* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0179 187 PANTHER BNAA05G36080D PROTEIN 4 187 - -
Apr2g0179 187 SUPERFAMILY YjgF-like 64 187 IPR035959 -
Apr2g0179 187 CDD YjgF_YER057c_UK114_family 79 185 - -
Apr2g0179 187 Gene3D - 59 186 IPR035959 -
Apr2g0179 187 PANTHER 2-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDA 4 187 IPR006175 -
Apr2g0179 187 Pfam Endoribonuclease L-PSP 70 186 IPR006175 -
Apr2g0179 187 ProSitePatterns Uncharacterized protein family UPF0076 signature. 163 181 IPR019897 -
Apr2g0179 187 TIGRFAM TIGR00004: reactive intermediate/imine deaminase 64 186 IPR006056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0179 Apr-Chr2 2424963 2430538 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0179 K09022 - gmx:100792467 319.701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0179 2 2424963 2430538 Apr2g0179 2 2424963 2430538 ECH