Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0167 ATGGGTTGCAGAAACAGAAACAGAGAATCGTTGACAGAGGAACACACTTGTTCATCTGCTTCTTCTGGTTCGTCACTGAGTGAGGCCTTGCTTTTCACCACTATGTGCATCGTTGGTCTCCCTGTTCATGTTCACGTTAAGGATGGCTCTGTTTATTCTGGAATCTTCCACACTGCCTCTGTTGACACCGATTATGGTATTGTTTTGAAGAAAGCAAGGATGAGCAAGAAGGGAAAGGGCAACACCAACGTTGGAAATGAGGGCATGGTAGATACGCTGGTGATTTTGTCAGGTGATCTTGTGCAAGTTGTCGCAAAGGGAGTAATGCTTCCTTCAGATGGCATTAGTGGAAACATAACTGGTCATGATGAGGAAGCAATTGTTCATAATGTTTGTTCCGAGAGTCTAACATGTGAGGTAGATAATCATACCCGGTCTTTGATGGATGCAAAACAAACTAATCAATCAAGACAAGCTGGAGATGACGAATCAAAAGAAAAAGCCAACAACTGTGAACAGAAGTCTGAGTTTGCTAATGAAAAAATTGATGAAAAGATTCAAAGCCTTGATTCAAGCCATGAAACTGATACATGTCATTGTCAAGAGGATGCTATTGAGCATGGAAACACTGATAGCACATCAAGTCCTTATGATAATGGATTATTCTGCAACAGTGCTCCTTCATCTGTTAAAGTTGATGATCAGCATACTGAAAGGTTTACTTTAGCAGACTCTCCCTCTAAAAATTCAACCCAAGGTATGGTGGATCTCATCTCAGATTCACGTAAGTTGCCAGCAAGGTCTGTTGAAATATCAGCTCCAAGGGGTACAGATTCTACCAGAAATGCTAAGGAATTTAAGCTCAATCCAGCAGCCAAAATTTTCTCTCCATCTTTTGTAAATCCTATTTCGGCAAGTTCTGCTGCAAACATGGTATACGTACCAAATAGCTCTCCTTTGGCACCTGTTGCTACTATCCAACCAGAAGTTGGATTCAATACTTTTACTTCTCGGCCCTCTACCCCTGTAAAGGTTGCACAGTATAGTAATTTGACAGTGGGAAATGGTGGCAGTGGCATTCAATTTTCACAACCTATTGTTGGACAACTGGCACATAGGAGCCAACCTCTTCGGTATGCTACACATTATACTCCTGTTTTGTCTGAACCTACTTATTTGCAGCCAAGCTCTACTGCTGTTATGGTTGGACGTTCCCCCCAGTTAGTCTATGTTCAGCCAGTTTCCCATGATTTGATTCATGGAGCAACAGCTATCTCACCAGTCTCAGGAGCTCGCCCTATGCTGAATCATGTACAATTTCCAAAGCAGCATGCAGGAGGAACAATTGGTCAAGCAATGCCAGTTTGTGTGCCCCCACCTGTCCTAACAAGTGGACAACAACCCTTTGCACTTCAAAGCCACATTCCACTTCTGCAACCTGGCTTTCCTGTGCCTCGACCTATTTCTGTCCCTGGACCAAATGGTTTCTATGGCACCAAGTTTTAG 1506 0.4303 MGCRNRNRESLTEEHTCSSASSGSSLSEALLFTTMCIVGLPVHVHVKDGSVYSGIFHTASVDTDYGIVLKKARMSKKGKGNTNVGNEGMVDTLVILSGDLVQVVAKGVMLPSDGISGNITGHDEEAIVHNVCSESLTCEVDNHTRSLMDAKQTNQSRQAGDDESKEKANNCEQKSEFANEKIDEKIQSLDSSHETDTCHCQEDAIEHGNTDSTSSPYDNGLFCNSAPSSVKVDDQHTERFTLADSPSKNSTQGMVDLISDSRKLPARSVEISAPRGTDSTRNAKEFKLNPAAKIFSPSFVNPISASSAANMVYVPNSSPLAPVATIQPEVGFNTFTSRPSTPVKVAQYSNLTVGNGGSGIQFSQPIVGQLAHRSQPLRYATHYTPVLSEPTYLQPSSTAVMVGRSPQLVYVQPVSHDLIHGATAISPVSGARPMLNHVQFPKQHAGGTIGQAMPVCVPPPVLTSGQQPFALQSHIPLLQPGFPVPRPISVPGPNGFYGTKF* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0167 501 Pfam Ataxin 2 SM domain 28 106 IPR025852 -
Apr2g0167 501 MobiDBLite consensus disorder prediction 1 22 - -
Apr2g0167 501 PANTHER POLYADENYLATE-BINDING PROTEIN INTERACTING PROTEIN 1 498 - -
Apr2g0167 501 MobiDBLite consensus disorder prediction 151 180 - -
Apr2g0167 501 MobiDBLite consensus disorder prediction 156 180 - -
Apr2g0167 501 PANTHER ATAXIN 2-RELATED 1 498 IPR045117 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0167 Apr-Chr2 2250202 2256289 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0167 - - gmx:100809285 764.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0167 2 2250202 2256289 Apr2g0167 2 2250202 2256289 ECH