Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0160 ATGGAACTGAAACTCATTCTAACGGTTTTGTTGTTGGTGTCTGCAACTGCCACTGCTGATTATGTTCGACCTCAGCCCCGAAAAGCCATACATCTCCCATGGGATTCAAAACCCTCTTCTTACCCTCAGCAGGTGCATATTTCTTTAGCTGGAGATCAGCACATGAGGGTTAGCTGGATTACTGATGATAAGTCTGCACCTTCAACTGTAGAATATGGAACATTGCCAGGGAGATATGACTCAGTAGCTGAAGGAGAGACCACCTCTTATAGTTATCTGTTCTATAGCTCAGGGAAGATACACCATGCTGTAATTGGGCCTTTAGAGCATAATTCTGTGTACTATTATCGATGCGGTGGACAAGGTCCAGAGTTCATGCTCAGAACTCCTCCAGCTCAATTTCCAATCACTTTTGCGGTGGCTGGGGATCTGGGTCAAACTGCTTGGACTAAATCAACATTAGATCACATTGACCAATGTAAATATGATGTTCATCTGCTTCCAGGAGATCTTTCCTATGCTGATTATATCCAGCATCGATGGGACACATTTGGTAGGCTAGTGCAGCCACTTGCTAGTTCAAGACCATGGATGGTAACACAAGGGAATCATGAAGTAGAGAGCATACCCTTGTTAAAAGATGAGTTTGTGTCTTATAATTCCAGATGGAAAATGCCATCTGAGGAAAGTGGATCAAGTTCAAATCTCTATTATTCATTTGAAGTTGCAGGTGTTCACATTATCATGCTTGGGTCCTATGCAGATTATGATGAGTACTCGGAACAATATAGGTGGCTAAAGGCAGATCTGTCAAAGGTGAACAGGAAAAGGACCCCTTGGTTGCTAGTGTTGTTTCATGTGCCGTGGTATAATAGTAATACAGCTCATCAAGGGGAAGGGAGTGATATGATGGCAGCTATGGAGCCATTGCTTTATGCTGCTAGCGTCGATTTAGTTCTTGCTGGGCATGTGCATGCCTATGAACGCTCGAAACGCATATACAGTGGAAGACTTGATCCTTGTGGTGCAGTCCATATAACCATTGGTGATGGAGGAAATAAAGAAGGCTTAGCTCCTAAGTATATAAATCCACAGCCAAAATGGTCAGAATTTCGTGAAGCTAGTTTTGGTCATGGCGAGCTAAAGATGGTCAACTCTACGCATGCTTTCTGGAGTTGGCACAGAAATGACGATGACGAGCCTGTAAAATCTGATGATGTCTGGATAACCTCTTTGGCCAGCTCAGGAAGTGTTGATCAGAAGAGAAATGAACTCAGGAATAAACTTATGACACCCTAA 1299 0.4326 MELKLILTVLLLVSATATADYVRPQPRKAIHLPWDSKPSSYPQQVHISLAGDQHMRVSWITDDKSAPSTVEYGTLPGRYDSVAEGETTSYSYLFYSSGKIHHAVIGPLEHNSVYYYRCGGQGPEFMLRTPPAQFPITFAVAGDLGQTAWTKSTLDHIDQCKYDVHLLPGDLSYADYIQHRWDTFGRLVQPLASSRPWMVTQGNHEVESIPLLKDEFVSYNSRWKMPSEESGSSSNLYYSFEVAGVHIIMLGSYADYDEYSEQYRWLKADLSKVNRKRTPWLLVLFHVPWYNSNTAHQGEGSDMMAAMEPLLYAASVDLVLAGHVHAYERSKRIYSGRLDPCGAVHITIGDGGNKEGLAPKYINPQPKWSEFREASFGHGELKMVNSTHAFWSWHRNDDDEPVKSDDVWITSLASSGSVDQKRNELRNKLMTP* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0160 432 Coils Coil 256 276 - -
Apr2g0160 432 Gene3D - 41 132 - -
Apr2g0160 432 SUPERFAMILY Purple acid phosphatase, N-terminal domain 31 131 IPR008963 GO:0003993|GO:0046872
Apr2g0160 432 Pfam Iron/zinc purple acid phosphatase-like protein C 343 399 IPR025733 -
Apr2g0160 432 PANTHER PURPLE ACID PHOSPHATASE 4 421 - -
Apr2g0160 432 SUPERFAMILY Metallo-dependent phosphatases 135 402 IPR029052 -
Apr2g0160 432 Pfam Purple acid Phosphatase, N-terminal domain 42 122 IPR015914 GO:0003993|GO:0046872
Apr2g0160 432 CDD MPP_PAPs 133 411 IPR041792 -
Apr2g0160 432 PANTHER ACID PHOSPHATASE RELATED 4 421 IPR039331 GO:0003993
Apr2g0160 432 Pfam Calcineurin-like phosphoesterase 137 327 IPR004843 GO:0016787
Apr2g0160 432 Gene3D - 133 420 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0160 Apr-Chr2 2158580 2161857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0160 42 423 Miscellaneous Gene Families AT2G03450 26.797 2.82e-29 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0160 K22390 - gmx:100782338 816.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0160 2 2158580 2161857 Apr2g0160 2 2158580 2161857 ECH
Apr2g0160 2 2158580 2161857 Apr9g1725 9 26387226 26389741 PCT