Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2646 ATGACTGAAATTGTGGTTATTTTATACTGGAATGGAAGAGTGTACGAAGAAAATGAGGTTGATTCAAGGAGTGGAAATTACACAATTTTAGATGTATGTGATGATGAAGACATTGATTGTATGATAAGTGCTTGTCAAGAACGGCATGAAAGAGTAGTTGAGTTATATGTGGATATTGCGGTTGGTGAAACTTCTCATGTAGGTGAAAGTTTGTTATGTTTAAATGTATCACTCCCAACTGTGTCTGTTAGTGACAATGAAGAAGAGTATGCAATTGGAGGAGATGACGAAGATGAGTACGATGATGACTATGAAGATGAAGGAGAAATTCCTTTAGATAGTTCTTCTGATACTGATTTGGAAGATGGGTTCGATTCAATGATGACAGTTCCAAACACTGAAAGAAATAACATTATGCAAGGACAATCTGCAGATTCTATAACACTTTTTTGGAACATAAGTTCACACTACACTGCTATTAATTGGGAACATCCTGATCAAGAATTGGATTTTTTGGAGTTGCATTCGTCACAATCATGGGTACAAGGAGATGCATTATATGTTGGACAACTATTTGACTCTAAAGAGGAGGTAAAGATGGCGATAAAACATTATGCAATGAAGAAACATCAAACATTTTTTGTGGTTGAGTCAAAAGCATCAACTCATTTTGTCAAGTGTATGGTCAAAGAAGAACCTTCTGTTCCCGTTTCATTAATCCAAGAGAGAATAAGTGGCCAATTTGGGTATTCAGTTTCATACAAAAAAGCATGGAAAGCAAAGCAAAAAGCAATTGTGACAATATTTGGTGATTGGGATGAATCTTATGCAACATTACCAAGATGGTTAGAATACATGCAATTACATGCTCCAGGGTCAGTTTACAAAATTGAGACCAATGATTATGTGAGAGGTAATGTAATGGATAATAGATTCAAAGTCTTTCATCGAGTATTTTGGTCGTTTAGGCAATGTCGTGAAGCCTTCAAGTTTTGCAAGCCTATAATACAGGTAGACGGTACCTTTTTGTATGGTAAGTATAAGCAAACATTGCTTATTGGTACAACTCAAGATGGCAATAACAGTGTGCTTCCTATAGCATTTGCCATTGTTGAAGGAGAAACATTATCAACATGGGAATGGTTCTTAGCCATGATCCGTCTAAATGTTACTGATAAAACTGGAATTTGTTTAATATCTGATCGTCATCAAAGTATTAAAAGTGCTGTGTCTAATCCATATATTGGGTGGCAACCTCCTAATGCTTACCATGTTTATTGCATTCGTCACATTGCAAGCAATTTCAATAGAAGATTCAAAAATTCCGCAATGAAGAGTATGCTTATGAAATTAGCGTATACACCTTGCAAGCAAAGATTTGAAGCTGGTCTTAATAAATTTCGTTCGCATTCTCCTGAAGTTCAAACATGGATTGACAACATATCAAAGGAAAAGTGGAGCTTGACTTATGATCATGAAGGGCGGCGTTATGGTCACATGATGACTAATTTGTCTGAGTCAATGAATAAAGTTTTAAAAGGGGCAAGAAATCTCCCAATTACTGCCCTTGTGAAAGCAACCTATAGTAGATTGGTCGAATATTTTGTCAAACGGGGTGAAAGCGCAATCAATGACATGAACAATGGTAAAAGGTATTGTCGTAAATTAATTGAAGCTATAGAAAAAAATCAAGAAGAAGCATCTTCACATCAGGTTCGTCGTTACGACATACAAAGTACAAGGTTCGAGATTGAAGAGGCTTTTAATCCAATGACACAAAGGGGGGGTCATAAGTGGAGTGTGATATTATCTACACGTGAATGTGAATGTGGCAAATTTCAGGCATACCGATACCCTTGTTCACATGTCATAGCCGCTTGTGTTACTGTAAGTATAGACTTTTGGCAGTATGTTGATCCTGTATATACTCTGCAGTATGTTGTGAATGCATACTCATCTCAGTGA 1965 0.3649 MTEIVVILYWNGRVYEENEVDSRSGNYTILDVCDDEDIDCMISACQERHERVVELYVDIAVGETSHVGESLLCLNVSLPTVSVSDNEEEYAIGGDDEDEYDDDYEDEGEIPLDSSSDTDLEDGFDSMMTVPNTERNNIMQGQSADSITLFWNISSHYTAINWEHPDQELDFLELHSSQSWVQGDALYVGQLFDSKEEVKMAIKHYAMKKHQTFFVVESKASTHFVKCMVKEEPSVPVSLIQERISGQFGYSVSYKKAWKAKQKAIVTIFGDWDESYATLPRWLEYMQLHAPGSVYKIETNDYVRGNVMDNRFKVFHRVFWSFRQCREAFKFCKPIIQVDGTFLYGKYKQTLLIGTTQDGNNSVLPIAFAIVEGETLSTWEWFLAMIRLNVTDKTGICLISDRHQSIKSAVSNPYIGWQPPNAYHVYCIRHIASNFNRRFKNSAMKSMLMKLAYTPCKQRFEAGLNKFRSHSPEVQTWIDNISKEKWSLTYDHEGRRYGHMMTNLSESMNKVLKGARNLPITALVKATYSRLVEYFVKRGESAINDMNNGKRYCRKLIEAIEKNQEEASSHQVRRYDIQSTRFEIEEAFNPMTQRGGHKWSVILSTRECECGKFQAYRYPCSHVIAACVTVSIDFWQYVDPVYTLQYVVNAYSSQ* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2646 654 Pfam MuDR family transposase 185 228 IPR004332 -
Apr1g2646 654 MobiDBLite consensus disorder prediction 89 119 - -
Apr1g2646 654 MobiDBLite consensus disorder prediction 88 119 - -
Apr1g2646 654 Pfam SWIM zinc finger 601 627 IPR007527 GO:0008270
Apr1g2646 654 PANTHER POLYPROTEIN, PUTATIVE-RELATED 247 504 - -
Apr1g2646 654 SMART 26again6 606 633 IPR006564 GO:0008270
Apr1g2646 654 PANTHER - 247 504 - -
Apr1g2646 654 Pfam MULE transposase domain 335 434 IPR018289 -
Apr1g2646 654 ProSiteProfiles Zinc finger SWIM-type profile. 599 631 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2646 Apr-Chr1 35798810 35801410 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2646 - - aprc:113852382 1315.06