Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2645 ATGACGAGCTCAGTGGAGAAGGAAGGTTCTGCGAGCGACGAAACCTTCTCTTTGGAGCTACCTGCTCCACCTGGTTGGAAGAAGAAGTTCTTCCCAAAGAAGGCTGGTACCCCAAAGAAAAATGAGATTGTCTTTACTGCACCAACAGGAGAGGAGATCAATAACAAGAAGCAACTGGAACAATATTTGAAAGCATACCCTGGTGGTCCGCCTGTATCAGAATTTGATTGGGGCACCGGTGCGACCCCAAGAAGATCAGCAAGAATCAGTGAGAAGGCCAAGGTAGCTCCTCCACCAGAATTTGAGCCCCCAAAGAAACGCGGAAAAAGATCATCAGTTTCAAAACAGGAAACTTCCAAGGAAGAGAAAGAAGAGACTAAGGAAATGCAAATTCAAGAAGCTGATAACGTCAAGAATGAAAAAGATACAGAGGAGGAAGAGAATGTTGTAAAGGCAAATCTAGATGAAAAGAGTGTGGAGGATACCCAAGTCAACAAATCCACTCATTTTGGAGAGGCTAAAGCTAGAGAAAATGTCGGGGTACCTATTGATGTGAAGAAATCCAATACTGCTGATGGAAAACTACATGCATTGAAAGATAAAGTTGATGACAAAGGAGCTGAGGGTTCTGAAATTTCTCTGAGAAAAGATGAAGAAAAGATTGGCCAACCACAGGAAGAGACAGAAAAATATTGTGGATCTAAGGAGCCAGAGAAACCTGAAACATGCACTACTGCTAATAAAACGGTTGACGTGGAAGAAATGAATAAAGAGGAACACAACAGAAGTACTCATGAATCTGAAGGAGATATCAAGGAAATAGAAGGAACAAAAGTGAATAGTGAAGAACATCACAAGCTTGAAGAGATAAACAAGACAGCTGAAGCAGAGTTGACCGAAAATGGCAATCATGGGATTTGA 921 0.4191 MTSSVEKEGSASDETFSLELPAPPGWKKKFFPKKAGTPKKNEIVFTAPTGEEINNKKQLEQYLKAYPGGPPVSEFDWGTGATPRRSARISEKAKVAPPPEFEPPKKRGKRSSVSKQETSKEEKEETKEMQIQEADNVKNEKDTEEEENVVKANLDEKSVEDTQVNKSTHFGEAKARENVGVPIDVKKSNTADGKLHALKDKVDDKGAEGSEISLRKDEEKIGQPQEETEKYCGSKEPEKPETCTTANKTVDVEEMNKEEHNRSTHESEGDIKEIEGTKVNSEEHHKLEEINKTAEAELTENGNHGI* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2645 306 MobiDBLite consensus disorder prediction 98 163 - -
Apr1g2645 306 Gene3D - 14 86 - -
Apr1g2645 306 SUPERFAMILY DNA-binding domain 12 105 IPR016177 GO:0003677
Apr1g2645 306 MobiDBLite consensus disorder prediction 189 237 - -
Apr1g2645 306 PANTHER METHYL-CPG BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 4 305 IPR039622 -
Apr1g2645 306 Pfam Methyl-CpG binding domain 18 79 IPR001739 GO:0003677
Apr1g2645 306 Coils Coil 120 147 - -
Apr1g2645 306 MobiDBLite consensus disorder prediction 251 285 - -
Apr1g2645 306 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 12 82 IPR001739 GO:0003677
Apr1g2645 306 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 11-LIKE 4 305 - -
Apr1g2645 306 MobiDBLite consensus disorder prediction 1 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2645 Apr-Chr1 35783986 35788838 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2645 - - ccaj:109793377 416.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2645 1 35783986 35788838 Apr1g2645 1 35783986 35788838 ECH