Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2642 ATGCCAAGGCCAGGCCCAAGACCTTACGAGTGCGTGAGGAGAGCGTGGCACAGCGAGAGGCACCAACCCATGAGAGGTTCCATCATTCAACAGATTTTCAGGGTCTCCACCGAGGCTCACTCTCCCGCTACTAAGACCAACAAGGAGTGGCAAGAGAAGCTTCCCGTGGTTGTTCTCAAGGTCGAAGAAATCATTTACTCCAAAGCCAATTCCGAGGCCGAATACCTGAACCCCGACACGCTCTGGGACCGCCTCAGCGATGCCATTGAGACTATCATACGCAGGGACGACACCAGTGAAACCGGTGAGCTTTTGCCGCCATGTGTTGAAGCTGCTCTTAACCTTGGCTGCAAGCCACTGAGAACATCCAGGAGTGATAGGCATAATAACCCCAGGACTTACCTTACTTCTAGAAATCAACAGCATCCTCATTCTGTTTCTCCCAAAACTGTTGTGAGCAATCCCTTAAACTTTCTGCCAGTGCCGGATTCTAACCCTCACATCCACCAAAATGACTACACTTTTGCTGCTGTTCGACATCACCAACACTTGCCAGTGGAAACTAACACCTCCTTGAACTTGGGTTCGGTTTACCCGTTATATTATGGTTTTGAAGCCGGAAAGCCTCAATTAAGGACTAGCAACCAAGGAAACACTTGTTCTGACACAATCTTTGTTGGTAGACCGGTGGTTGGACCGGCGCTGGAGCCGTCTAGAATGGGTCTATTAGAAAATTTTTCCTGTAGAAGAATCCGTCATTTTCCAAACAGAATTGTGAAAGAAAGTGCTGTGGAGGAGGCAGGAGATAGGGAATGTGATTTGTCTTTGAGGTTGGGTATGTGTTTGCGGAGCAACGAAACAAGTTCAGCCTGTGAATTGGAAGATGTTGGGTTAAGAGGTTCTCAGGAGGGCATCAAATTTAGTAGCCGTTCATCTCAACGGAAAAATGAAGGGTACAGTTTTTACCCTAAAGGGACAGGTTATGATGCCATTTATTCTACTGAGTGGAATATAGAGGGTGATGATTGGAACAGTGTAGGGAGTTTTCAGAAGTGCAAGGCGTCTTTAGGTAGGTAG 1077 0.4745 MPRPGPRPYECVRRAWHSERHQPMRGSIIQQIFRVSTEAHSPATKTNKEWQEKLPVVVLKVEEIIYSKANSEAEYLNPDTLWDRLSDAIETIIRRDDTSETGELLPPCVEAALNLGCKPLRTSRSDRHNNPRTYLTSRNQQHPHSVSPKTVVSNPLNFLPVPDSNPHIHQNDYTFAAVRHHQHLPVETNTSLNLGSVYPLYYGFEAGKPQLRTSNQGNTCSDTIFVGRPVVGPALEPSRMGLLENFSCRRIRHFPNRIVKESAVEEAGDRECDLSLRLGMCLRSNETSSACELEDVGLRGSQEGIKFSSRSSQRKNEGYSFYPKGTGYDAIYSTEWNIEGDDWNSVGSFQKCKASLGR* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2642 358 MobiDBLite consensus disorder prediction 120 150 - -
Apr1g2642 358 Gene3D Coactivator CBP, KIX domain 11 92 IPR036529 GO:0003712|GO:0006355
Apr1g2642 358 PANTHER COACTIVATOR CBP, KIX DOMAIN-CONTAINING PROTEIN-RELATED 1 161 - -
Apr1g2642 358 PANTHER COACTIVATOR CBP, KIX DOMAIN-CONTAINING PROTEIN-RELATED 174 355 - -
Apr1g2642 358 PANTHER COACTIVATOR CBP, KIX DOMAIN-CONTAINING PROTEIN-RELATED 1 161 - -
Apr1g2642 358 PANTHER COACTIVATOR CBP, KIX DOMAIN-CONTAINING PROTEIN-RELATED 174 355 - -
Apr1g2642 358 MobiDBLite consensus disorder prediction 129 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2642 Apr-Chr1 35762000 35763679 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2642 - - aprc:113848975 734.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2642 1 35762000 35763679 Apr1g2642 1 35762000 35763679 ECH