Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2628 ATGGCCACTTCCAACCTCTCCCACCGAATTTCGCGGCCGTTCCCCGCGGCGTGCGTCAATTTCCGGCCACCAAGCAGCGCTGTTAACCTCCGCCACCTGGCAACTCCGAAGCCCAGAAAACTGGCCCTCAAAAAGTGGGCGATCCAACTGAGCTTAGCGGAGCAAAGCCCACCGAAAGCAACAGTGTTCGACATACAGCAACTCGTGGGCTTTCTCTACTCGGATCTTCCACACCTCTTCGACGATCAGGGTATTGATAAAACGGCCTACGACGAACGCGTGGTTTTTCGAGACCCAATCACCAAGCATGATAATTTGAGTGGCTACCTTTTCAACATTGCTCTTCTCAAAACACTCTTCAGGCCTCAGTTTGAGTTGCATTGGGTCAAACCGACAGGACCGTATGAGATAACTACAAGATGGACTATGGTCATGAAATTCGTGCTGCTTCCTTGGAAACCGGAATTGGTCTTCACTGGAACTTCCGTTATGGGCGTTAACCCAGAAAATGGCAAGTTCTGTAGCCACGTGGACTTTTGGGATTCAATAGAAAAAAATGATTATTTTTCTTTCCAAGGTTTGTGGGATGTAATCAAACAGTTGAGGATTTATAAGACACCGGAATTGGAATCACCCAAATATCAAATATTGAAAAGGACGACAAATTACGAGGTTAGACAGTATGATCCGTTCATAATAGTAGAAACAAATGGAGACAAGCTATCTGGGTCTACTGGCTTTAATGATGTTGCTGGATATATCTTTGGAAAGAATTCCACAATGGAGAAGATACCAATGACTACTCCTGTCTTCACTCAAGCCATGGATGACCTGTCCAAAGTGTCAATCCAAATAGTGCTTCCATTAGACAAAGAAACAGAAAGTTTACCAAATCCTAATCAAGAGACAGTTCGCTTGAGAAAGGTTGAAGGAGGCATAGCAGCAGTAATAAAGTTTAGTGGAAAACCCACAGAGGATATTGTTCGTGAAAAGGAGAAAACCCTGCGCTCCAATGTCATTAAAGATGGTCTTAAACCTCAGGTTGGATGTTTGCTTGCACGGTACAATGATCCAGGTCGAACATGGTCCTTTATAATGAGGAATGAAGTGCTCATATGGCTGGATGACTTTTCGTTGGATTAG 1143 0.4453 MATSNLSHRISRPFPAACVNFRPPSSAVNLRHLATPKPRKLALKKWAIQLSLAEQSPPKATVFDIQQLVGFLYSDLPHLFDDQGIDKTAYDERVVFRDPITKHDNLSGYLFNIALLKTLFRPQFELHWVKPTGPYEITTRWTMVMKFVLLPWKPELVFTGTSVMGVNPENGKFCSHVDFWDSIEKNDYFSFQGLWDVIKQLRIYKTPELESPKYQILKRTTNYEVRQYDPFIIVETNGDKLSGSTGFNDVAGYIFGKNSTMEKIPMTTPVFTQAMDDLSKVSIQIVLPLDKETESLPNPNQETVRLRKVEGGIAAVIKFSGKPTEDIVREKEKTLRSNVIKDGLKPQVGCLLARYNDPGRTWSFIMRNEVLIWLDDFSLD* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2628 380 Pfam Uncharacterized conserved protein (DUF2358) 67 176 IPR018790 -
Apr1g2628 380 PANTHER HEME-BINDING PROTEIN-RELATED 47 380 IPR006917 -
Apr1g2628 380 SUPERFAMILY NTF2-like 79 181 IPR032710 -
Apr1g2628 380 SUPERFAMILY Probable bacterial effector-binding domain 200 374 IPR011256 -
Apr1g2628 380 Gene3D Regulatory factor, effector binding domain 208 377 IPR011256 -
Apr1g2628 380 PANTHER SOUL HEME-BINDING FAMILY PROTEIN 47 380 - -
Apr1g2628 380 Pfam SOUL heme-binding protein 209 372 IPR006917 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2628 Apr-Chr1 35657022 35661538 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2628 - - gmx:100789568 683.715