Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2592 ATGGCATCATCCATAGTGGCTTCTTCCACCCCATTCTCTTCCACTCTCACCACTTCATTTCTCACTTCTTCCTCTTCCTTTTCCTCTTCTATCTTTCTCAAAACACACACTCTAAGACGCTCAGCCGTTTACCCTCTCTCTTTAGCGTCAGAACCACTGCGCAGGCTCATGGCTCGCGCCAGTCTTGGCCTCACTCACCCTGCCAATACCGAAGCGCCCAAGGTTTCTTTTGCGGCGAAGGAGGTTGACGTGGCGGAATGGAAAGGGGACTTGTTGGCTGTTGGAGTAACGGAGAAGGACGTGGCCAGAAACGCCGAGTCGAGATTCCAGAACGCGATTCTGAATGCGTTGGATTCCAAGTTGGGCGGGTTATTGGGCCAGGCCTCTTCCGAAGAGGACTTCGCCGGAAAACTGGGCCAGTCTACGGTTCTCAGAATCGCCTCCGGACTCGGATCCAAGCGAGTCGCCTTGCTCGGCCTTGGCGCGTCGGCGTCCACCACCACAGCTTTTAAGTCCCTCGGCGAGGCTGTCGCCGCCGCCGCCAAGTCCGCTCAGGCTGCCGACGTCGCTGTCGTCCTCGCCTCTTCCGATGGACTCTCCGCCGAATCGAAGCTCACCACCGCGTCCGCAATCGCGTCTGGGACTGTGCTGGGAACGTTTGAGGATAATAGGTACAAGTCAGAGTCGAAGAAATCGGCGCTTAGATCGGTTGATATTATTGGGCTTGGAACTGGGCCTGAATTGGAGAAGAAGCTAAAGTATGCTGGAGATGTTTCTTCTGGAATCGTTTTCGGAAGGGAGCTTGTAAATTCTCCGGCTAATGTGCTCACGCCAGGGGTATTGGCAGAAGAAGCATCAAAGATTGCTTCAACATATAGTGATGTTTTTACTACCAAAATATTGGATGCTGAGCAGTGTAAGGAATTGAAAATGGGGTCCTATCTTGGTGTTGCTGCAGCCTCGGCAAATCCTCCTCATTTTATTCATCTGTGTTATAAACCACCAAGTGGACCTGTCAATGTCAAGTTGGCATTAGTTGGAAAAGGTTTGACTTTTGATAGTGGTGGCTACAACATCAAGACAGGACCTGGCTGTTTGATTGAACTCATGAAATTTGATATGGGTGGTTCTGCTGCAGTTTTTGGAGCAGCAAAAGCTCTTGGTCAAATCAAACCTCTTGGAGTGGAGGTTCATTTTATAGTTGCAGCTTGTGAGAATATGATAAGTGGAACAGGTATGAGGCCTGGAGACATTGTCACAGCTTCAAATGGAAAGACTATAGAGGTTAATAACACAGATGCTGAGGGTAGGCTTACCCTGGCAGATGCTCTGGTGTATGCTTGTAACCAAGGGGCTGAAAAGATAGTTGACCTGGCAACTTTAACTGGGGCTTGTATAATTGCTCTTGGACCCTCAATTGCAGGTGTGTTTACACCCAGTGATGACCTGGCAAAAGAAATTTTTGATGCTTCTGAAGCGAGTGGGGAGAAATTATGGAGGATGCCATTAGAAGAAAGTTACTGGGAGTCAATGAAATCAGGAGTGGCTGATATGGTGAACACTGGTGGTAGACAAGGTGGTGCCATTACTGCTGCTCTTTTCTTAAAGCAGTTTGTTGATGAGAATGTTCAATGGATGCATATTGATATGGCTGGTCCAGTGTGGAATGATAAGCAGCGGTGTGCAACAGGATTTGGTGTTGCTACTTTAGTGGAATGGGTTTTGAGGAACGCATCTTAA 1740 0.4874 MASSIVASSTPFSSTLTTSFLTSSSSFSSSIFLKTHTLRRSAVYPLSLASEPLRRLMARASLGLTHPANTEAPKVSFAAKEVDVAEWKGDLLAVGVTEKDVARNAESRFQNAILNALDSKLGGLLGQASSEEDFAGKLGQSTVLRIASGLGSKRVALLGLGASASTTTAFKSLGEAVAAAAKSAQAADVAVVLASSDGLSAESKLTTASAIASGTVLGTFEDNRYKSESKKSALRSVDIIGLGTGPELEKKLKYAGDVSSGIVFGRELVNSPANVLTPGVLAEEASKIASTYSDVFTTKILDAEQCKELKMGSYLGVAAASANPPHFIHLCYKPPSGPVNVKLALVGKGLTFDSGGYNIKTGPGCLIELMKFDMGGSAAVFGAAKALGQIKPLGVEVHFIVAACENMISGTGMRPGDIVTASNGKTIEVNNTDAEGRLTLADALVYACNQGAEKIVDLATLTGACIIALGPSIAGVFTPSDDLAKEIFDASEASGEKLWRMPLEESYWESMKSGVADMVNTGGRQGGAITAALFLKQFVDENVQWMHIDMAGPVWNDKQRCATGFGVATLVEWVLRNAS* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2592 579 PANTHER LEUCINE AMINOPEPTIDASE 2, CHLOROPLASTIC-RELATED 44 579 - -
Apr1g2592 579 Pfam Cytosol aminopeptidase family, catalytic domain 265 571 IPR000819 GO:0006508|GO:0070006
Apr1g2592 579 Pfam Cytosol aminopeptidase family, N-terminal domain 93 228 IPR008283 GO:0006508|GO:0070006
Apr1g2592 579 PANTHER LEUCINE AMINOPEPTIDASE-RELATED 44 579 IPR011356 GO:0005737|GO:0019538|GO:0030145|GO:0070006
Apr1g2592 579 ProSitePatterns Cytosol aminopeptidase signature. 431 438 IPR000819 GO:0006508|GO:0070006
Apr1g2592 579 Gene3D Leucine Aminopeptidase, subunit E, domain 1 50 248 IPR043472 -
Apr1g2592 579 SUPERFAMILY Macro domain-like 76 261 IPR043472 -
Apr1g2592 579 CDD Peptidase_M17 90 574 IPR011356 GO:0005737|GO:0019538|GO:0030145|GO:0070006
Apr1g2592 579 PRINTS Cytosol aminopeptidase signature 343 360 IPR011356 GO:0005737|GO:0019538|GO:0030145|GO:0070006
Apr1g2592 579 PRINTS Cytosol aminopeptidase signature 367 388 IPR011356 GO:0005737|GO:0019538|GO:0030145|GO:0070006
Apr1g2592 579 PRINTS Cytosol aminopeptidase signature 405 426 IPR011356 GO:0005737|GO:0019538|GO:0030145|GO:0070006
Apr1g2592 579 PRINTS Cytosol aminopeptidase signature 427 447 IPR011356 GO:0005737|GO:0019538|GO:0030145|GO:0070006
Apr1g2592 579 PRINTS Cytosol aminopeptidase signature 455 470 IPR011356 GO:0005737|GO:0019538|GO:0030145|GO:0070006
Apr1g2592 579 Hamap Probable cytosol aminopeptidase [pepA]. 77 579 IPR023042 -
Apr1g2592 579 Gene3D Zn peptidases 249 579 - -
Apr1g2592 579 SUPERFAMILY Zn-dependent exopeptidases 260 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2592 Apr-Chr1 35369500 35377571 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2592 K01255 - gmx:100808230 964.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2592 1 35369500 35377571 Apr1g2592 1 35369500 35377571 ECH