Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2587 ATGCTGTCTGTGCCACTGCTTCACCCTGAAACCATGGAGGCAGAACCATCAAATCCCTCAGATTCGCTCTGGGGTCAGATATCCAAATATACAACCATGTTCAGTGAAACATACAAAAGAAAGCCAATTCATTATTGGGTTCTTCTTGTTCTCAGCATCATAGCAATGCTTGTGGCATTTCCTTCTTCCAGTATTCTGTCTCGTGTTTATTATGATAATGGTGGCCAAAGCAAGTGGATCATATCTTGGGTGGCTGTTGCTGGATGGCCTATAACTGCATTGATATTGTTTCCTACATACCTCACTAGGAGAACCTTTCCTACTCCTCTGAACTTAAAACTAATTCTATCTTATATTATTTTGGGTTTCCTTAGTGCTGCTGATAACCTCATGTATGCTTATGCCTATGCTTATCTCCCTGCATCCACTGCCTCACTAGTGGCATCATCATCCCTTGTGTTTTCTGCACTCTTTGGATACTTTCTTGTGAAGAACCAAGTGAATGCTTCAATAGTAAATTCCATATTCGTCATAACTGCTGGATTGACCATCATTGCCTTGGATTCAAGTTCAGACAGATATGCTAATATCACTGACAGTGAATACATTATGGGATTTGTATGGGATGTTTTGGGATCTGCTCTTCATGGGCTTATTTTTGCTCTCTCAGAGTTAGTCTTTGTGAAGTTTCTGGGAAGAAGATCCTTCATTGTTGTTTTGGAACAGCAAGTTATGGTTTCACTACTCGCATTTCTATTTACCACTGTAGGGGTAATTGTGAGTGGTGATTTTCAAGCAATGGCATCTGAGGCTACCACTTTCAATGGTGGTAAAGCTGCTTATTGTCTTGTTCTCATATGGAGTGCAATCACTTTTCAACTGGGGGTTTTGGGGGCCACTGCTGTAGTTTTCTTGGCTTCAACTGTGCTAGCTGGTGTGCTTAATGCAATAAGAACACCAATTACAAGCATTGCAGCTGTTATACTGCTAAATGATCCAATGAGTGCTTTCAAGATCCTCTCCCTAATTGTTACCTTTTGGGGATTCGGTTCGTATATTTATGGCAGTTCTATGGGTGAAAAATGA 1086 0.4079 MLSVPLLHPETMEAEPSNPSDSLWGQISKYTTMFSETYKRKPIHYWVLLVLSIIAMLVAFPSSSILSRVYYDNGGQSKWIISWVAVAGWPITALILFPTYLTRRTFPTPLNLKLILSYIILGFLSAADNLMYAYAYAYLPASTASLVASSSLVFSALFGYFLVKNQVNASIVNSIFVITAGLTIIALDSSSDRYANITDSEYIMGFVWDVLGSALHGLIFALSELVFVKFLGRRSFIVVLEQQVMVSLLAFLFTTVGVIVSGDFQAMASEATTFNGGKAAYCLVLIWSAITFQLGVLGATAVVFLASTVLAGVLNAIRTPITSIAAVILLNDPMSAFKILSLIVTFWGFGSYIYGSSMGEK* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2587 361 PANTHER OS09G0467300 PROTEIN-RELATED 14 358 IPR030182 GO:0015211|GO:0016021
Apr1g2587 361 Pfam Purine nucleobase transmembrane transport 48 359 - -
Apr1g2587 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 92 190 - -
Apr1g2587 361 PANTHER PURINE PERMEASE 5-RELATED 14 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2587 Apr-Chr1 35336946 35339677 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2587 2 349 Organic Solute Cotransporters AT2G24220 68.966 3.54e-152 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2587 - - gmx:100790781 590.112