Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2585 ATGACCCATTGGCAGGTAGAAAAAGAAGATAAATTGGGGATGGAAGTGAGCAAAAGAAGAATAGGGGCTAGAGGGAGTGTGGTTGCGGGGTCTGTGTGGGAGAGCAGAATGAAGAGTGATGAAGTGAGAGGGGGAATCAAGGTCTTCAATGCAGAGGATAATCCTGAAGAAAATGGTAATGGTGGTGGTGCTTCAAGATCGAAAAGAAACCCAATTGGTGGAAAGAGAAAAACTTGGAAATCAGAGAGCTTTGATGGGTCAATTCAGGTAGCTAGAGGAAAGCCAGAGACCCAGAAGAGTTCAGAGGAACAGTGTAAAGAACTCAGCATTTCTTCTTCTTCTGATGGAATCAAGAAGAGCCCAATTCACTCCAGAAAGATTGCAGCTTGTGCAGATAAATTTGAGAGAAGCCCAATTCATTCCAGAAAGCTGAGATCTGAATCACACAAGGGTGGTTCAGATGGTGGCAGAGAAGGTGGTGATGCAGGGCAATTGAGAAAGACCAAATCAGATTCAATCAAGAAGAATGCTGCTTCTGCTTCAATTCAATTGAGGAAGACGAAATCCGAGTTGAATCGAGTTCCAGATGAGTCAACTGATGGTGGATGTGAAAAGATTGAAGTTGAGAATGGGAAGAATGATGCTGATGATAAAAATTGCATGGATGTCGATGATGTGTGCCAAGAGAAGGTGATATCAAGCAGTTCAGAGAATGTGGGTGTGGTCCAATGTTCAACAGAATTGTCGGTTCAGGGCGGTGATGATGATTCAGATGATGTGATTGTTGATGAAGTGGACGAAGGAGATGAAGAGGAGGAGTTTGAGATTGAGATGGAAGAGAGAATTGATGTGAAGGAAATTAGTATTCCAGAATCTGAGGTTGTGAAGGAACCAGAAAATAATAAGGTGGTTGTGAATGAACCGGAACCTAAGAAGGTGGTTGTGAATGAACCAGAATCTAAGAAGGTGGTTGTGAATGAACCAGAACAACCCAAGAAGATTCTGAACGAACCAGAATCTAAGAGAGTTGTGAGTGCCCACATGCGATTTCATCACAGAAATGAAAGAAGACCCGTTTCTGTCCCTCTTGTTCAGAAGCATTCTCCAGTTAGAAGGAATTCCACAATTTACCAAAATTTCCCCGAAGCAAATTCAATTCCAAAAGCACAAGAATACCGTAGCTTTCCACAGACCCAAAGCAAGTTGCAGAGTCTAGTGGATTTAATTATGTGGAGAGATGTTTCAAGATCAGCATTTGTTTTCGGGTTTGGAACATTCATCATTGTTTCATCCTCTTATGCAAAGGATATCAATCTGAGCCTTATTTCAGTGATGTCCTATATAAGTCTTGTCTATCTCGCTGTTATATTCCTGTATAGATCCCTAATTTGCAGGGGTGTAATAGAAGTTGATGACTCAAATTATGTACTGGGAGAAGAAGATGCAATTTGGCTGCTAAAATTGATCCTCCCATACTTGAATGAGTGCCTATCAAAACTCAAAGCCCTGTTTTCTGGAGATCCGGGCACCACAATAAAGTTGGCAGTTTTGCTCTTTGTTTTGGCTAGATGTGGCAGCTACATAACCATTTGGAAGATGGCCAAATTTGGCTTCTTTGTAGTTTTTACCGTACCAAAGATCTGCTCTTCGTATTCTGCACAGTTAACTGCATATGCAAATTTTTGGATTCGTCGATTCCGGGATGCATGGGATTCATGCACTCACAAGAAAGCCGTGGCTCTTGGCATCTTTGGGCTTGTATGGAATTTATCATCAGTTGTTGCTCGCATTTGGGCAGTATTCGTGCTATTTGCGGCCTTCAGATACTATCAACAACATTATTTGGTGAGAGATGAATGTGGGGAAGAGGAAGGCCTAGGAGGATGTGATGAAACATGGGAAGAACCAGTTGGAGTTAGACAGAAGCAAGGACGTGTAGCCAACTTTGTTGATACCAATAAAGTAAAGAAAGGGTTCTAA 1980 0.4197 MTHWQVEKEDKLGMEVSKRRIGARGSVVAGSVWESRMKSDEVRGGIKVFNAEDNPEENGNGGGASRSKRNPIGGKRKTWKSESFDGSIQVARGKPETQKSSEEQCKELSISSSSDGIKKSPIHSRKIAACADKFERSPIHSRKLRSESHKGGSDGGREGGDAGQLRKTKSDSIKKNAASASIQLRKTKSELNRVPDESTDGGCEKIEVENGKNDADDKNCMDVDDVCQEKVISSSSENVGVVQCSTELSVQGGDDDSDDVIVDEVDEGDEEEEFEIEMEERIDVKEISIPESEVVKEPENNKVVVNEPEPKKVVVNEPESKKVVVNEPEQPKKILNEPESKRVVSAHMRFHHRNERRPVSVPLVQKHSPVRRNSTIYQNFPEANSIPKAQEYRSFPQTQSKLQSLVDLIMWRDVSRSAFVFGFGTFIIVSSSYAKDINLSLISVMSYISLVYLAVIFLYRSLICRGVIEVDDSNYVLGEEDAIWLLKLILPYLNECLSKLKALFSGDPGTTIKLAVLLFVLARCGSYITIWKMAKFGFFVVFTVPKICSSYSAQLTAYANFWIRRFRDAWDSCTHKKAVALGIFGLVWNLSSVVARIWAVFVLFAAFRYYQQHYLVRDECGEEEGLGGCDETWEEPVGVRQKQGRVANFVDTNKVKKGF* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2585 659 Pfam Reticulon 406 560 IPR003388 -
Apr1g2585 659 PANTHER RETICULON-LIKE PROTEIN B17 14 659 IPR044647 -
Apr1g2585 659 MobiDBLite consensus disorder prediction 119 173 - -
Apr1g2585 659 PANTHER RETICULON-LIKE PROTEIN B21 14 659 - -
Apr1g2585 659 MobiDBLite consensus disorder prediction 43 219 - -
Apr1g2585 659 MobiDBLite consensus disorder prediction 104 118 - -
Apr1g2585 659 MobiDBLite consensus disorder prediction 174 188 - -
Apr1g2585 659 MobiDBLite consensus disorder prediction 189 219 - -
Apr1g2585 659 ProSiteProfiles Reticulon domain profile. 405 568 IPR003388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2585 Apr-Chr1 35317073 35321513 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2585 K20720 - gmx:100801188 821.231