Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2566 ATGCTTCCTGAGATCTCTGGGAGGCTTCCTTTGAGAACCTGTAGGGGTGTAATTGTACACCTGGAATTGCCTGATGATACGAAAGGTTATCCTGAAAATGGGCCGTCTATATTATCAGATGCATGGATTTCTGTTCAGGGCCCTCGCAGTCTGAATCTGGGCTCAACTTGGGAGTGGAAATCCATAAATTCATCACGAAATGTTTCAACTGATGAAGCTTCAGAAGCTCTTCTACAGCTTTTACCAAAGGCATCTTCCGTTTATCCGGGAATAAAGGATTGGGTTTTCAATGGAGCAAGAGCTGGTCTAAGGGCAATGCCTCCACTCACGCCGCTTGGATCACTTCCACTTTTGGGTTGTATCAACGATATCATAGGCGGAAATCATACTTGTAAGTATTGGTTATTTGGAGGACTAGGCTCAAGAGGATTGTTATACCATGGTTGGCTTGGTAATTTGATGGCACACGCTGTGCTTTCCTGTAATGAAGAAGTAATTTCATCCGAATTGACATCTTGGAAAGCGTCTAAACCCAAATTTTAG 543 0.4346 MLPEISGRLPLRTCRGVIVHLELPDDTKGYPENGPSILSDAWISVQGPRSLNLGSTWEWKSINSSRNVSTDEASEALLQLLPKASSVYPGIKDWVFNGARAGLRAMPPLTPLGSLPLLGCINDIIGGNHTCKYWLFGGLGSRGLLYHGWLGNLMAHAVLSCNEEVISSELTSWKASKPKF* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2566 180 Gene3D - 11 107 - -
Apr1g2566 180 Gene3D - 8 163 IPR036188 -
Apr1g2566 180 Pfam FAD dependent oxidoreductase 7 156 IPR006076 GO:0016491
Apr1g2566 180 PANTHER FAD-DEPENDENT OXIDOREDUCTASE FAMILY PROTEIN 1 166 - -
Apr1g2566 180 PANTHER SARCOSINE DEHYDROGENASE-RELATED 1 166 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2566 - - aprc:113850292 370.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2566 1 35163284 35164666 Apr1g2566 1 35163284 35164666 ECH