Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2563 ATGGAAGCGTGTAGCGGAGGAGGAGGATCTGAACGCGGTGAAGAGAAAGGGTTATTCGAATACTTTGGTTGGGTTTATCACCTTGGCGTCAATTCCGTTGGCCGTGAATACTGTCACCTTCGATTCCTTTTCGTCAGGGGCAAGTGCGTCGCCATGTACAAGCGTGACCCTCACGAGAACCCTGACATTAAACCCATTAGGCAGGGAGTCATAGGTGCCGCACTAATGGTGGAGGAGTTAGGACAACGGAAGGTCCACCATGGGGATCTTTATGTAATACGCTTCTATAATCGATTAGATGAGACCAGAAAGGGAGAAATTGCTTGTGCTACAGCCGAGGAAGCCCAGAGATGGATGGAAGCATTTGAGCATGCTAAGCAACAGGCTGAATATGAGCTGTCAGAAGGAAGTAGTGCCAGAGACAGACTAAACCCGGAAATGGAGATCAATCTGGAAGGAAATCGACGAAGAGTGAGGCGGTATGCTTCTGGCTTAAGGAAGTTTATAAAAATTGGCCAAGGCCCAGAGACACTCTCACGTATATCATCAAAGATTTTTGGTAGTTCAGATGGGTTTGAAGGGGACACCGGAGATGCATTTGAAGTAAATCAATGGAAATGTGTTCGTACCATGGCTGGCATTAGAATTTTTGAGGATGTTTCTGATAACAAGAATGGTAAGGGTGTCCTTGTTAAATCAGTTGGTGTTATTGATGCAAGTGCAGATAGTGTTTTTGAAGTGTTTTTAAACACTGAACGACAGAAAAGATATGAGTGGGATATGTTGATGGGTGACTTGGAGTTGGTAGAGTCTTATGATGGCCATTACGACATTGTTTATGGAACATACGATCCTAAGTATTTAACCCGGTGGCATTCGAAGCGGGATTTTATTTTCTCTAGGCAATGGTTTCGGGCACAAGATGGAACGCACACTATCTTGCAATTTCCTGCTATACATAAGAAAAAGCCTCCAAGATCAGGATATCGACGAACAAAAATTAATCCATCCACATGGGAGATCAGATATTTGAACACACCTATGGGATCAAATAGATCAAGATGTTTAGTGACCCAAACTTTAGAGATACACTCTGCATACTGGCATCGATGGAAGAACAGCCAATGCTCAAAATTTGAGAAGAGCATCCCTTATGCATTGTTGTGCCAAGTGGCAGGTCTAAAGGAATATATTGGAGCCAATCCGGCACTCCACCAACAATATGCCACCACTGTTGTTCATTCCAAAATCTCTGATGCTTCTATGTCCCCTGCTGCGTATATAGATGCAGAAGTGCAAGATGAGTTTTATGATGCAATCGCTGCTGAGTCGTCATCTGATGAAGAAAGTGATGAGGATAAGGAGCTAGATCAGGAGCAGAGAGTCAAACAAAAGCGAACTGCAGCTCCAGAACTAACAAAAGAATTAGACCCTCAAGCAAGACCTATCTCAATTGATGCATGTGACTTGCATGGTTCTTTACGCAAAGGAGAGAATGAGAATGACACAGACTGTTGGACTTCTCCTAGTGGTGAAGGATTTATGATTAGAGGAAAGAACTACCTGAAAGATAATTCTAAGGTAGTTGGAGGAGATCCTCTTCTCAAGCTCATTGCAGTTGATTGGTTAAAAGTTAATAAACCTGTAGACAAAATTGCACTGCACCAAAGAAATCTGGTTCAGTCAGAAGCTGGGAAAAAGCTTCCATTTGTCCTTGTATTTAATTTACAGGTTCCAGCTAAACCAAACTACAGCTTGGTTCTATATTACGCATCTGACAGACCTATAAATAAAGATTCTCTACTGGCTAAGTTTTTAGATGGAAATGACACATTTCGGGACTCCAGATTCAAATTAATTCCAAGCATAGTTGAGGGATATTGGATGGTCAAGCGAGCTGTTGGGACAAAAGCTTGCTTACTGGGGAAAGCTGTGACTTGTAAATACTATAGACAGGACAATTTTATGGAGATAGATGTAGATATTGGATCATCCTCTGTAGCTAGGAGTGTCATTGGCCTTGTTTTGGGATACGTCACAAGCCTAGTTGTTGACCTTGCAATTTTGATAGAGGCAAAAGAAGAGGCAGAGCTCCCAGAGTATATTCTTGGAACTGTCCGATTAAACCGCTTAAAACCTGAATCTGCGGTACCATTTGAGGTTTGA 2166 0.4247 MEACSGGGGSERGEEKGLFEYFGWVYHLGVNSVGREYCHLRFLFVRGKCVAMYKRDPHENPDIKPIRQGVIGAALMVEELGQRKVHHGDLYVIRFYNRLDETRKGEIACATAEEAQRWMEAFEHAKQQAEYELSEGSSARDRLNPEMEINLEGNRRRVRRYASGLRKFIKIGQGPETLSRISSKIFGSSDGFEGDTGDAFEVNQWKCVRTMAGIRIFEDVSDNKNGKGVLVKSVGVIDASADSVFEVFLNTERQKRYEWDMLMGDLELVESYDGHYDIVYGTYDPKYLTRWHSKRDFIFSRQWFRAQDGTHTILQFPAIHKKKPPRSGYRRTKINPSTWEIRYLNTPMGSNRSRCLVTQTLEIHSAYWHRWKNSQCSKFEKSIPYALLCQVAGLKEYIGANPALHQQYATTVVHSKISDASMSPAAYIDAEVQDEFYDAIAAESSSDEESDEDKELDQEQRVKQKRTAAPELTKELDPQARPISIDACDLHGSLRKGENENDTDCWTSPSGEGFMIRGKNYLKDNSKVVGGDPLLKLIAVDWLKVNKPVDKIALHQRNLVQSEAGKKLPFVLVFNLQVPAKPNYSLVLYYASDRPINKDSLLAKFLDGNDTFRDSRFKLIPSIVEGYWMVKRAVGTKACLLGKAVTCKYYRQDNFMEIDVDIGSSSVARSVIGLVLGYVTSLVVDLAILIEAKEEAELPEYILGTVRLNRLKPESAVPFEV* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2563 721 CDD START 201 388 - -
Apr1g2563 721 ProSiteProfiles START domain profile. 205 358 IPR002913 GO:0008289
Apr1g2563 721 Gene3D - 199 387 IPR023393 -
Apr1g2563 721 SMART PH_update 19 129 IPR001849 -
Apr1g2563 721 Pfam Protein ENHANCED DISEASE RESISTANCE 2, C-terminal 506 711 IPR009769 -
Apr1g2563 721 MobiDBLite consensus disorder prediction 443 473 - -
Apr1g2563 721 PANTHER PLECKSTRIN-LIKE (PH) AND LIPID-BINDING START DOMAIN PROTEIN 9 721 - -
Apr1g2563 721 MobiDBLite consensus disorder prediction 456 472 - -
Apr1g2563 721 PANTHER ENHANCED DISEASE RESISTANCE-RELATED 9 721 IPR045096 -
Apr1g2563 721 SUPERFAMILY Bet v1-like 200 362 - -
Apr1g2563 721 Pfam START domain 222 342 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2563 Apr-Chr1 35130695 35148909 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2563 - - gmx:100786048 1143.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2563 1 35130695 35148909 Apr1g2563 1 35130695 35148909 ECH
Apr9g2729 9 34268262 34288029 Apr1g2563 1 35130695 35148909 PCT