Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2557 ATGGAATCTTGTGAGCAATTTGGGTTGTGGGTGGTCTTGATTTTGTGCTTGACATTTCAAATTCAATCCGGTTATGGGTTCTACCTTCCGGGTAGTTATCCTCATAAGTATGGTGTGACGGATGAGTTGTGGGTGAAGGTGAATTCCCTCACTTCCATTGACACTGAAATGCCCTTTAGCTATTACAGCTTGCCCTTCTGCAACCCTGAGGGTGGTGTCAAGGACAGTGCTGAGAACCTTGGGGAACTCCTCATGGGGGACAGGATAGAGAATTCTCCTTACAGGTTTAGGATGTACACCAATGAGTCTGAGATTTTCTTGTGCCGGGTTGAATCTTTATCTGGTGATCAGTTCAAGCTCTTGAAGGAGAGGATTGATGAGATGTATCAGGTTAATTTGATACTTGATAATTTACCTGCCATTAGGTTCACACAGAAAGAGGGGTACTTTATGAGATGGACAGGGTACCCTGTTGGTATTAAGGTTCAGGATGGGTATTATCTGTTTAACCATCTCAAGTTCAATATTCTTGTCCACAAGTATGAGGAGACCAATGTGGCTCGTGTAATGGGCACCGGAGACGGTGCAGAGGTGATCCCAGTTGGCAAGGGAGGGTCTTCTGGTAAGCCTGGATACATGGTTGTTGGGTTTGAGGTGATTCCTTGTAGTATTATGCATAATGCTGATTCTGTGAAAAACTTGAAAATGTATGATAAATATCCGTCGGCTATCCAATGCGATCCGTCCACTGTGGCAATGCCTATTAAAGAGGGTCAGCCGGTTGTGTTCACCTATGAGGTTACATTTGAGGAGAGTAACATCAAATGGCCTTCTAGATGGGATGCTTACTTGAAGATGGAGGGAGCAAAAGTGCATTGGTTCTCCATCCTTAATTCGCTTATGGTGATCACTTTTCTTGCTGGTATTGTTCTTGTGATCTTCCTGAGGACTGTTAGGAGGGATCTGACCCGTTATGAGGAGCTTGATAAGGAGGCTCAAGCACAGATGAATGAAGAGTTATCTGGTTGGAAGCTTGTTGTGGGAGATGTTTTCCGTGCTCCATCGAATCCTGCTTTGTTGTGTGTGATGGTTGGGGATGGAGTTCAGATTCTTGGGATGTCTGTTGTGACAATATTGTTTGCTGCACTTGGATTCATGTCGCCAGCCTCTCGTGGAACACTGATCACAGGCATGCTTTTTTTCTACATGATACTTGGTATTGCTGCTGGTTATGTCTCAGTTCGGTTATGGAGGACAATTGGCTTTGGTGATCAGAAGGGCTGGGTTTCCATTGCATGGAAGGCCGCGTGTTTCTTTCCTGGCATTTCCTTTTTGATCCTCACAACCTTGAACTTCCTATTGTGGGGAAGCCACAGCACCGGAGCCATTCCATTTTCACTCTTTGTAATACTAATCTTGCTTTGGTTCTGCATTTCTGTGCCTCTTACCCTTGTTGGTGGTTACTTTGGATCTAAGGCACCTCTCATTGAGTATCCAGTTCGAACCAACCAAATTCCTCGTGAAATTCCCCAGCAGAGGTACCCATCATGGCTGTTAGTTCTGGGTGCTGGCACCCTTCCATTTGGTACCTTGTTCATTGAGCTCTTCTTCATCATGTCCAGCATTTGGATGGGCCGTGTTTACTATGTCTTTGGGTTTCTCTTCATCGTTTTGATCCTTCTTGTGATGGTTTGTGCTGAGGTATCTCTAGTTCTAACATACATGCACCTTTGTGTGGAGGATTGGAAATGGTGGTGGAAATCTTTCTTTGCCTCTGGTTCTGTTGCCATATACATCTTCTTATACTCCATAAACTATCTTGTGTTTGATCTCAAGAGTTTGAGTGGTCCTGTTTCTGCAACTCTATACTTGGGTTACTCACTCTTCATGGTTCTAGCAATCATGCTGTCTACAGGCACAATTGGGTTCCTCTCTTCATTTTGGTTCGTGTATTACTTGTTCTCTTCAGTCAAGTTGGATTGA 1983 0.4433 MESCEQFGLWVVLILCLTFQIQSGYGFYLPGSYPHKYGVTDELWVKVNSLTSIDTEMPFSYYSLPFCNPEGGVKDSAENLGELLMGDRIENSPYRFRMYTNESEIFLCRVESLSGDQFKLLKERIDEMYQVNLILDNLPAIRFTQKEGYFMRWTGYPVGIKVQDGYYLFNHLKFNILVHKYEETNVARVMGTGDGAEVIPVGKGGSSGKPGYMVVGFEVIPCSIMHNADSVKNLKMYDKYPSAIQCDPSTVAMPIKEGQPVVFTYEVTFEESNIKWPSRWDAYLKMEGAKVHWFSILNSLMVITFLAGIVLVIFLRTVRRDLTRYEELDKEAQAQMNEELSGWKLVVGDVFRAPSNPALLCVMVGDGVQILGMSVVTILFAALGFMSPASRGTLITGMLFFYMILGIAAGYVSVRLWRTIGFGDQKGWVSIAWKAACFFPGISFLILTTLNFLLWGSHSTGAIPFSLFVILILLWFCISVPLTLVGGYFGSKAPLIEYPVRTNQIPREIPQQRYPSWLLVLGAGTLPFGTLFIELFFIMSSIWMGRVYYVFGFLFIVLILLVMVCAEVSLVLTYMHLCVEDWKWWWKSFFASGSVAIYIFLYSINYLVFDLKSLSGPVSATLYLGYSLFMVLAIMLSTGTIGFLSSFWFVYYLFSSVKLD* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2557 660 Pfam Endomembrane protein 70 58 613 IPR004240 GO:0016021
Apr1g2557 660 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 12 660 - -
Apr1g2557 660 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 12 660 IPR004240 GO:0016021
Apr1g2557 660 Coils Coil 315 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2557 Apr-Chr1 35085004 35087464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2557 1 660 Miscellaneous Gene Families AT5G35160 84.115 0.0 1129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2557 K17086 - gmx:100819368 1268.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2557 1 35085004 35087464 Apr1g2557 1 35085004 35087464 ECH
Apr9g2731 9 34296898 34299573 Apr1g2557 1 35085004 35087464 PCT