Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2549 ATGAGAATGCAATCCAAGAGTTTGAGCCAAGCTCCAGCTCTCACACTCTTCCCTGGTCTGAAACCCCCTCACAAAACCCTACTATTCCACCAAATCTGTGTTCTTGTCATCACATTCCTTGCTTATGCATCCTTTCATGCCTCTAGGAAGCCTCCCAGCATTGTTAAGAGTGTTTTGGGACCCACAATTTCATCCAATGAAACTCAAGTTGACAACTTGAGTTCCAATGATGCAGGTTGGGTCCCTTTTAATGGAACCCGGGGCACTCACCGGCTTGATTCTTCGTCTGCTATTGGGTTTTTGGAAGCATGGAAGTTACCCGGAGTGGCTCCATTTTCTTTCTGTCTCTTTTTCTCGAAGCTCGTGGCTTACACTTTTCTGTACTGGTTGCCCTTCTACATAAGGCACACAGCTGTCGCAGGTGTGCATATATCTAACAAAACTGCTGGATTACTATCAACAATATTTGACATTGGGGGAGTCCTTGGTGGAATCACAGCAGGTTTCATTTCTGACATGATTGAAGCACGTGCTATTACTTCAATCATGTTTTTGTTTCTGTCTATTCCAGCTCTTGTTTTGTATCGTGCTTTTGGGAGTCTCTCTATGTTGACCAACATCCTTTTGATGTTTCTTTCGGGGTTTTTGGTGAATGGTCCCTACTCACTAATCACAACTGCAGTGGCTGCCGATCTTGGTACACAGAGCTTGAATGGTCGGAATTCTCGAGCGCTGGCTACTGTTACTGCAATCATAGATGGTACTGGTTCTGTTGGAGCTGCCCTTGGGCCACTTTTGGCAGGGTATATTTCAACTAAGGGATGGAACAGTGTCTTTTTTATGCTCATTTTGTCTATTTTCTTTGCTGGTTTATTCTTGATTCGTGTTGCAAGAACTGAGATAAGAGAGAAGCTTTCAGGAAAGTGA 927 0.4401 MRMQSKSLSQAPALTLFPGLKPPHKTLLFHQICVLVITFLAYASFHASRKPPSIVKSVLGPTISSNETQVDNLSSNDAGWVPFNGTRGTHRLDSSSAIGFLEAWKLPGVAPFSFCLFFSKLVAYTFLYWLPFYIRHTAVAGVHISNKTAGLLSTIFDIGGVLGGITAGFISDMIEARAITSIMFLFLSIPALVLYRAFGSLSMLTNILLMFLSGFLVNGPYSLITTAVAADLGTQSLNGRNSRALATVTAIIDGTGSVGAALGPLLAGYISTKGWNSVFFMLILSIFFAGLFLIRVARTEIREKLSGK* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2549 308 Gene3D MFS general substrate transporter like domains 104 306 IPR036259 -
Apr1g2549 308 Pfam Major Facilitator Superfamily 113 300 IPR011701 GO:0022857|GO:0055085
Apr1g2549 308 PANTHER GLYCEROL-3-PHOSPHATE TRANSPORTER 5-RELATED 5 92 - -
Apr1g2549 308 PANTHER GLYCEROL-3-PHOSPHATE TRANSPORTER 5-RELATED 94 306 - -
Apr1g2549 308 PANTHER MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B 5 92 - -
Apr1g2549 308 PANTHER MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B 94 306 - -
Apr1g2549 308 SUPERFAMILY MFS general substrate transporter 90 301 IPR036259 -
Apr1g2549 308 ProSiteProfiles Major facilitator superfamily (MFS) profile. 108 308 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2549 Apr-Chr1 35024525 35027232 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2549 93 308 Organic Solute Cotransporters AT2G13100 78.241 1.28e-116 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2549 K13783 - gmx:100804097 401.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2549 1 35024525 35027232 Apr1g2549 1 35024525 35027232 ECH