Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2543 ATGCCATGCTTCACCCCACACCCCTCTCTTTTACTCTCCCTCCTTCTCTTCTCTCTGTCTTTTTTCTCTCTCTCTACACCTGCACAACCCTCTCCTTTCCATTCCTTACGCATTCCAGATGATTTTGAGGTTGTTGGTGAGAGAGGTTATGACAAGGTGCTACCTTGGAAGACGAGGAGATCCATGGCTGAGGATGCCACGCCCAACACGTCTCTGATATTGGCTCAGAAGAGAACCACTAGGAAGGACCCTCTTGACAATTTTAACCGTTACACTGGGGGTTGGAATATCAGCAATCGCCATTACATTGCTTCGGTTGTTTTTACTGCGGTTCCCTTCTTTGTTGTTGCTGCAGTGTGGTTCGTGCTTTTTGGGCTTAGTTTATCCTTAATCTGCTTGTGTTACTGTTGTTGCCCTAGAGAGCCATATGGTTATTCTCGTTTGGCCTATGCTTTGTCCTTGATCCTCCTCGTTCTCTTCACCCTTGCAGCAATAGTTGGATGTATTCTCCTTTACACTGCTCAGGGGAAGTTTCATGGGAGCACCACAAACACACTGGAATATGTGGTGAGTCAGGCTGACTTCACTGCTGAAAACCTCAGGAACGTGTCAGATTATCTTGATGCAGCTAAGAAGATTGGAGTCGATGCCGTTTTTCTGCCGTCTGATGTTCAGTCGAACATTGACGAGGTTCAGACTAAGATAAATTCTTCTGCTGTGGAACTTTCCAGCAAGACGAAAGATAATTCAGAGAAAATAAAAGAAGGCCTAGATGGAATGAGATTGGCTCTGGTTATTCTTGCTGCTGTTATGCTCTTTCTTGCATTTCTTGGATTCTTATTTTCGATATTTGGGCTGCAAGGTCTTGTATACTTCTTGGTACTCGTTGGGTGGTTTCTTGTTGCTGGCACATTTATACTTTGTGGTGTATTTCTTTTTCTGCACAACGTTGTTGCAGATACATGTGTTGCCATGGATCAGTGGGTGCAGAACCCTACTGCGCATACTGCCTTGGATGAAATTCTTCCATGTGTGGATAATGCAACTGCTCAGGAAACCTTGTTACGAACCAAGGATGTGACATACCAACTTGTCAATTTGGTTGACAAGATCATTTCCAATGTCACAAATAGAAATTTCCCAGCTGCCGCAGGACCACTGTATTACAATCAATCAGGCCCTTTAATGCCTCTTCTGTGTAATCCATTTCACCCTGGTTTCACAAGTCGGTCTTGTGCTCCTGGGGAAGTTCCATTGGATAATGCTACAGAGGTATGGAAGAAGTATACATGTGAAGTTTCTTCATCAGGCATTTGTAAGACGCCGGGTCGAATGACACCAACCATTTATGGCCAAATGGAAGCTGCAGTGAACATAAGTTATGGCTTGTATCATTATGGGCCATTCTTGGTTGATTTACAAGACTGCACTTTTGTGAGGAAAACATTCACAGACATCAGCAACAATTATTGTCCTGGTCTGCAGAGGAATAGTCAGTTGATTTATGTTGGATTAGTTTTGGTATCTGCTGGTGTTATGCTGTCTTTGATCTTTTGGGTCATCTATGCAAGAGAGCGGCGGCACCGTGTTTATACTAAACAGTTCATTGCCGGTTAA 1617 0.4385 MPCFTPHPSLLLSLLLFSLSFFSLSTPAQPSPFHSLRIPDDFEVVGERGYDKVLPWKTRRSMAEDATPNTSLILAQKRTTRKDPLDNFNRYTGGWNISNRHYIASVVFTAVPFFVVAAVWFVLFGLSLSLICLCYCCCPREPYGYSRLAYALSLILLVLFTLAAIVGCILLYTAQGKFHGSTTNTLEYVVSQADFTAENLRNVSDYLDAAKKIGVDAVFLPSDVQSNIDEVQTKINSSAVELSSKTKDNSEKIKEGLDGMRLALVILAAVMLFLAFLGFLFSIFGLQGLVYFLVLVGWFLVAGTFILCGVFLFLHNVVADTCVAMDQWVQNPTAHTALDEILPCVDNATAQETLLRTKDVTYQLVNLVDKIISNVTNRNFPAAAGPLYYNQSGPLMPLLCNPFHPGFTSRSCAPGEVPLDNATEVWKKYTCEVSSSGICKTPGRMTPTIYGQMEAAVNISYGLYHYGPFLVDLQDCTFVRKTFTDISNNYCPGLQRNSQLIYVGLVLVSAGVMLSLIFWVIYARERRHRVYTKQFIAG* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2543 538 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 44 534 IPR040283 -
Apr1g2543 538 PANTHER TRANSMEMBRANE PROTEIN 44 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2543 Apr-Chr1 34966590 34971072 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2543 - - gsj:114387485 885.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2543 1 34966590 34971072 Apr1g2543 1 34966590 34971072 ECH
Apr9g2746 9 34419204 34422385 Apr1g2543 1 34966590 34971072 PCT