Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2534 ATGGATCTCGATGGGGGGAGTTCATCATCAGTTAGCACAGGAGTGCCGGCAATTTCAGGACGCCCAACACGACATGGTGTATGCTATCAGTTTAAACAGCAGAACCTTCCAGCATGTAAACCTGTCCTTACTCCTGCAGTAGTCATTGCTACATTTCTATTGATGGGTTTCATTTTCATTCCTGTTGGACTTGTTACACTTAATGCCTCAAATAGTGTTGTTGAAATTGTGGATAGGTATGACATTGATTGTGTACCTGAAGAATTTAGAAGCAACAAGGTTGCATATATCAAAGATGACTCAATCTCCAAAAACTGTTCGCGATTCTTGAAGGTAATCAAGCCCATGAGAGCACCGATTTATATCTATTATCAGCTTGATAACTATTACCAGAACCACCGACGATATGTCAAAAGTAGAAGTGACCGTCAGCTCTTACATGGACTTGGATACAACAGTACCAGTTCTTGTAAACCTTTAGAGTCCTCCCATGGTCTTCCAATTGTACCTTGTGGGTTGATAGCTTGGAGTTTGTTCAATGATACATACAAGTTTAGTCGCGGGCCATCTGATTTGAAGGTCAATAGGAAAAACATTGCGTGGAAGAGTGATCGCAATCAGAAATTTGGAAAGCATGTTTACCCATTTAATTTTCAGAATGGTACCTTGATTGGGGGTGGAAAGCTAGATCCAAGTATTCCTCTAAGTGATCAAGAAGATCTAATAGTTTGGATGCGGACTGCTGCTCTCCCCAGCTTCCGGAAGTTATATGGTAGAATTGAAGAGGATTTGGATGAAGATGATGTTATAGTTGTCCACCTAAAGAATAACTATAACACTTACAGTTTTGGTGGAAAGAAGAAGCTTGTTCTGTCAACATCAAGCTGGTTGGGTGGAAAAAATCACTTCCTTGGAGTTGCCAATTTATTTGTTGGTGCCTTTTGTATATTAATCTCCATCATCTTCTTGTTGCTTCATGTGAAAAATCCTAGACCTTACGGAGACATGGCCTACTCATCTTGGAATAGGAAAAACATTGCTAGCTGA 1047 0.4031 MDLDGGSSSSVSTGVPAISGRPTRHGVCYQFKQQNLPACKPVLTPAVVIATFLLMGFIFIPVGLVTLNASNSVVEIVDRYDIDCVPEEFRSNKVAYIKDDSISKNCSRFLKVIKPMRAPIYIYYQLDNYYQNHRRYVKSRSDRQLLHGLGYNSTSSCKPLESSHGLPIVPCGLIAWSLFNDTYKFSRGPSDLKVNRKNIAWKSDRNQKFGKHVYPFNFQNGTLIGGGKLDPSIPLSDQEDLIVWMRTAALPSFRKLYGRIEEDLDEDDVIVVHLKNNYNTYSFGGKKKLVLSTSSWLGGKNHFLGVANLFVGAFCILISIIFLLLHVKNPRPYGDMAYSSWNRKNIAS* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2534 348 PIRSF Lem3/Cdc50 11 344 IPR005045 GO:0016020
Apr1g2534 348 Pfam LEM3 (ligand-effect modulator 3) family / CDC50 family 67 331 IPR005045 GO:0016020
Apr1g2534 348 PANTHER ALA-INTERACTING SUBUNIT 2-RELATED 16 347 - -
Apr1g2534 348 PANTHER CELL CYCLE CONTROL PROTEIN 50 16 347 IPR005045 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2534 Apr-Chr1 34905659 34914774 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2534 - - gmx:100789806 628.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2534 1 34905659 34914774 Apr1g2534 1 34905659 34914774 ECH