Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2531 ATGGACGAGTCGTGGAGAATGCGAATGGGATTGACGCCGGCCCTCCCACGCCGGCGATCCATGGAGGATCGCTCATCTTCCCGGACACGGCGGTCCATCTTCGCCGGAGCCTCCAAGCCGGAATCGATGGACCCCGACGACTTCGCCGACGTCTTTGGTGGCCCTCCCAGAAGCCTCCTCGTGCACAAGTTCTCCAGGTCCAGTTCCTTCTACGAGGAAATTTTCCGGCCGCCTGAGTTCACATCTCCGGCACTGGCGAAAGGCCGGAGCTTGCCGGTGTTCCGGATTCCGGCGAAGAACGAGGCGTTTTACAGCGACATATTCGGGTCTGACGATGACCGGAAGTCAAGAGAGCGGTCGGGGCCGCAATCGAAAGCAAAATCAAAGTCCAATTCATCGTCGGTGCTTAGTTCCGAGGAGTTGAGCCCTCTCCGGCCGGCGATCGGTGATGACGTGGCATTGTCTGCCTTTGTTTCGAAGCTCAGGCCAATCAATGTCCCATGCAGATGGAACTCATCTACTATGATGTCTGAGGAACACCCAATTAAACAAGGGAGGCCGCTTTTTCCATGCAATGGTCAGCCATTTGAAATTCATAGTGAGGATAATGAGTACAAGGAGAACTTCAAAAGTCCTCATTTAGGATTCTCAAGAAGAGTCTCGTCTCCTGAAACAATTAGCCTTGAATCAAACTCATATCAAAGCATGAAGGTATCCAATGATGATTGGGAACTCAGTTCCCCATTTTCTGCTGTCTCTGGACTCTGTCAAGAACCTGAGGTCAAATCTTCAGTTCATGATTATATTCTTCCTGAGCTAGTAATAGAACAGGATGATGATGAAGTTATGAGCTCCTATGTCATAGAAGTCAACTCCAACCACAGAGAGGAAAATTGTGGCGCAGCAGACATTGATGAAGCAATTGCATGGGCCAAAGAAAAGTTTCAGTCACGAAATTCTGATGAAGAACCAAGCTTGAGAAATGATGGCAATGAGCACACTACAGGGATCGAAGGAAGGTCTGATGCAGGCGAATATGACAACGAAGGAATGGGAAAAGTTAAATCTTCTAAGAAAGTACAGACAGAAACAGAGAAGTTGGACAGAGATATAAGATTGTGGTCATCTGGCAAGGAAACTGACATCCGGCTACTACTTTCGACACTACATCATATTTTATGGCCTGAAAGTGGCTGGTATGCTGTTCCTCTTATGAACCTAATAGAAAGTTCACAAGTGAAGAAGGCCTATCAGAAAGCAAGATTATCCCTCCATCCTGACAAACTGCAGCAAAGAGGAGCAACATTCCTGCAGAAGTATATAGCAGAGAAGGCCTTCTCCATTCTACAGGATGCATGGACTGCATTCATTTCTGAAGACGTTTCGTTCTAA 1392 0.4777 MDESWRMRMGLTPALPRRRSMEDRSSSRTRRSIFAGASKPESMDPDDFADVFGGPPRSLLVHKFSRSSSFYEEIFRPPEFTSPALAKGRSLPVFRIPAKNEAFYSDIFGSDDDRKSRERSGPQSKAKSKSNSSSVLSSEELSPLRPAIGDDVALSAFVSKLRPINVPCRWNSSTMMSEEHPIKQGRPLFPCNGQPFEIHSEDNEYKENFKSPHLGFSRRVSSPETISLESNSYQSMKVSNDDWELSSPFSAVSGLCQEPEVKSSVHDYILPELVIEQDDDEVMSSYVIEVNSNHREENCGAADIDEAIAWAKEKFQSRNSDEEPSLRNDGNEHTTGIEGRSDAGEYDNEGMGKVKSSKKVQTETEKLDRDIRLWSSGKETDIRLLLSTLHHILWPESGWYAVPLMNLIESSQVKKAYQKARLSLHPDKLQQRGATFLQKYIAEKAFSILQDAWTAFISEDVSF* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2531 463 Gene3D DnaJ domain 358 461 IPR036869 -
Apr1g2531 463 MobiDBLite consensus disorder prediction 107 141 - -
Apr1g2531 463 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 1 458 - -
Apr1g2531 463 MobiDBLite consensus disorder prediction 315 361 - -
Apr1g2531 463 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 1 458 - -
Apr1g2531 463 MobiDBLite consensus disorder prediction 107 124 - -
Apr1g2531 463 CDD DnaJ 399 453 IPR001623 -
Apr1g2531 463 SUPERFAMILY Chaperone J-domain 356 459 IPR036869 -
Apr1g2531 463 MobiDBLite consensus disorder prediction 125 140 - -
Apr1g2531 463 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2531 Apr-Chr1 34876650 34880094 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2531 - - gmx:100801416 785.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2531 1 34876650 34880094 Apr1g2531 1 34876650 34880094 ECH