Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2520 ATGGCAAACGAGCAAATGAAGCCTGTTGCAACGCTTCTTTTGGGGCTCAATTTTTGCATGTATGTCATAGTTTTGGGCATTGGTGGATGGGCCATGAACAAAGCTATAGATCATGGTTTTGAAATAGGTCCCGGACTGCAACTTCCTGCTCATTTTTCACCCATACAATTTCCAATGGGAAATGCTGCCACTGGATTCTTTGTGACATTTGCTTTGCTTGCTGGAGTTGTTGGTGTTGGATCAATCATTTCAGGAGTCAATCATATCCGTTCATGGACTTCAGAGAGCTTGCCATCTGCAGCTTCAGTTGCTGCCATTGCGTGGGCTCTTACCCTTCTTGCCATGGGCTTTGCCTGCAAAGAGATTGAGCTTAACGTGAGAAATGCCCGCCTGAAAACAATGGAGGCTTTTCTGATTATCCTCTCAGCTACACAACTTTTCTACATAGCTGCAATCCATGGTGCTGCTGCATACAGGAGATAA 483 0.4513 MANEQMKPVATLLLGLNFCMYVIVLGIGGWAMNKAIDHGFEIGPGLQLPAHFSPIQFPMGNAATGFFVTFALLAGVVGVGSIISGVNHIRSWTSESLPSAASVAAIAWALTLLAMGFACKEIELNVRNARLKTMEAFLIILSATQLFYIAAIHGAAAYRR* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2520 160 PANTHER ABA INDUCED PLASMA MEMBRANE PROTEIN 1 160 - -
Apr1g2520 160 Pfam AWPM-19-like family 16 155 IPR008390 -
Apr1g2520 160 PANTHER AWPM-19-LIKE FAMILY PROTEIN 1 160 IPR008390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2520 Apr-Chr1 34783573 34785136 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2520 1 154 Miscellaneous Gene Families AT5G46530 74.026 4.64e-83 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2520 - - gmx:100527291 284.263