Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2511 ATGGAAGGAGGCATACCAGAAGCTGATATGTCTGCTTTCAGAGAATGTTTGTCTCTGTCATGGAAGAATCCTTATGTTCTTCGCCTTGCTTTTTCTGCTGGAATTGGAGGCCTTCTCTTTGGCTATGACACTGGAGTTATATCGGGGGCTCTTCTGTATATCAGAGATGAATTCAAGGCAGTTGATCAGAAGACTTGGCTTCAGGAAGCCATAGTAAGTACTGCAATTGCTGGAGCAATAATAGGAGCTTCAGTTGGGGGATGGATCAACGATCGATTTGGAAGGAGAGTAGCAATTCTTCTTGCAGATGCGCTCTTTCTAACAGGGTCAATAATCATGGCTGCTGCTACCAGTCCAGCTATTCTAATTGTGGGTCGTGTGTTTGTTGGGCTTGGTGTTGGCATGGCTTCAATGGCATCCCCTCTTTACATTTCAGAGGCTTCTCCAACCAAAGTTAGAGGAGCCCTTGTAGGCCTCAACAGTTTTCTCATCACTGGGGGACAGTTCCTTTCCTACCTCATCAACTTGGCCTTCACTAAGGCACCTGGGACATGGAGGTGGATGTTAGGGGTAGCTGCAGCACCTGCTTTGATACAAATTGTACTAATGTTGTCACTCCCTGAATCCCCCCGTTGGTTGTACCGCAAGGGTAGGGAGGAGGAAGGACAAGCGATTATGAGAAAGATTTATCCACCTCACGATGTTGAAGGTGAAATTCAAGCTTTGAAGGAATCAGTTGATATCGAAATTAAGGAATCAGAAACATCAGAAAAGATCAGCATGATGAAACTTCTGAAAACCACTGCTGTGAGAAGAGGATTATATGCAGGCATGGGGCTCCAATTTTTCCAGCAGTTTGTAGGGATCAACACTGTGATGTACTACAGCGCCACCATTTTTCAGTTAGCTGGTTATGCATCTAACAGAACAGCTTTGCTTCTTTCACTCGTCACATCAGGCCTTAATGCATTTGGTTCAATTTTGAGCATATACTTCATTGACAAAACTGGTAGAAAAAAGCTTGCTTTAATCAGTTTGTTCGGTGTTGTGTTCTCTCTGGCCCTCCTAACTGTAACTTTTCGCGAAAGTGAAGTTCACTCTCCAATGGTTAGTGCCATTCAAACCTCTAGTTTCAATGGCACCTGCCCTGATTACAAAGCAGCTTTGAACCCTGGTAAATGGAATTGCATGACATGCCTAAAGGCTTCACCATCTTGTGGTTTTTGTGCTGCTGATGATAAGCTCTTACCTGGGGCATGTTTGATCTCCAATGATGATACAAAGAATATGTGTGGTAATGATCATAGAGCATGGTACACTAGGGGATGTCCTAGCAAATATGGTTGGGCTGCACTAATAGGCCTTGCTCTTTACATAATCTTCTTTTCACCTGGAATGGGAACTGTTCCGTGGGTTGTGAATTCTGAGATCTATCCTTTGAGGTATAGAGGGGTTTGTGGAGGAATGGCATCCACAACTGTTTGGATTTCCAACCTCATTGTTTCCCAGTCATTTTTGTCCTTGACACAAACTGTTGGGACAGCATGGACATTTATGATGTTTGGAATTGTTGCTGTTGTGGCAATTTTCTTTGTCATTATTTTTGTACCTGAAACCAAAGGGGTTCCAATGGAGGAAGTAGAGAAGATGCTGGAACAAAGATCTGTGCAGCTTAGGTTTTGGCGGAAGAGAGATTCTGGCTCTCAGAAGCACTGA 1716 0.4382 MEGGIPEADMSAFRECLSLSWKNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDEFKAVDQKTWLQEAIVSTAIAGAIIGASVGGWINDRFGRRVAILLADALFLTGSIIMAAATSPAILIVGRVFVGLGVGMASMASPLYISEASPTKVRGALVGLNSFLITGGQFLSYLINLAFTKAPGTWRWMLGVAAAPALIQIVLMLSLPESPRWLYRKGREEEGQAIMRKIYPPHDVEGEIQALKESVDIEIKESETSEKISMMKLLKTTAVRRGLYAGMGLQFFQQFVGINTVMYYSATIFQLAGYASNRTALLLSLVTSGLNAFGSILSIYFIDKTGRKKLALISLFGVVFSLALLTVTFRESEVHSPMVSAIQTSSFNGTCPDYKAALNPGKWNCMTCLKASPSCGFCAADDKLLPGACLISNDDTKNMCGNDHRAWYTRGCPSKYGWAALIGLALYIIFFSPGMGTVPWVVNSEIYPLRYRGVCGGMASTTVWISNLIVSQSFLSLTQTVGTAWTFMMFGIVAVVAIFFVIIFVPETKGVPMEEVEKMLEQRSVQLRFWRKRDSGSQKH* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2511 571 CDD MFS_HMIT_like 32 538 - -
Apr1g2511 571 ProSitePatterns Sugar transport proteins signature 2. 128 153 IPR005829 GO:0016021|GO:0022857|GO:0055085
Apr1g2511 571 Gene3D MFS general substrate transporter like domains 20 388 IPR036259 -
Apr1g2511 571 SUPERFAMILY MFS general substrate transporter 18 549 IPR036259 -
Apr1g2511 571 ProSiteProfiles Major facilitator superfamily (MFS) profile. 29 540 IPR020846 GO:0022857
Apr1g2511 571 PRINTS Sugar transporter signature 37 47 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr1g2511 571 PRINTS Sugar transporter signature 123 142 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr1g2511 571 PRINTS Sugar transporter signature 284 294 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr1g2511 571 PRINTS Sugar transporter signature 452 473 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr1g2511 571 PRINTS Sugar transporter signature 475 487 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr1g2511 571 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 1 571 - -
Apr1g2511 571 Pfam Sugar (and other) transporter 447 550 IPR005828 GO:0016021|GO:0022857|GO:0055085
Apr1g2511 571 Pfam Sugar (and other) transporter 30 361 IPR005828 GO:0016021|GO:0022857|GO:0055085
Apr1g2511 571 PANTHER GENERAL SUBSTRATE TRANSPORTER 1 571 - -
Apr1g2511 571 Gene3D MFS general substrate transporter like domains 431 559 IPR036259 -
Apr1g2511 571 TIGRFAM SP: MFS transporter, sugar porter (SP) family 20 365 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2511 Apr-Chr1 34697117 34702584 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2511 1 571 Organic Solute Cotransporters AT1G30220 70.312 0.0 833
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2511 K08150 - gmx:100796800 987.638
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2511 1 34697117 34702584 Apr1g2511 1 34697117 34702584 ECH