Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2504 ATGGCTTGCGTGAAATTGGGTTCCAAAGTGGATGCATTCCAGTGTCAAGGACAGGCCTGGTTCTGCACAACTGGACTTCCCAGTGATATAGTTGTTGAAGTTGGCGAGATGTCCTTCCATCTTCACAAGTTCCCTTTGCTCTCTAGAAGTGGGGTTTTGGAAAGGATGATTGCCGAGGTTTCTGAATTAGAGGAAGAATGTGTCATACGCCTTCAAGACATTCCTGGTGGGGCTAAAACATTTGAACTTGTAGCAAAATTTTGCTATGGCGTGAAACTTGAACTTACAGCATCAAATGTTGTATACCTCTGGTGTGCTGCAGAGCAGCTTGAAATGACTGAGGAATATGGTGAAGGAAATCTTATTTCACAGGCTGAAACTTTTTTCAATCAAGTGGTCCTTCGAAGTTGGAAAGACTCTCTGAGGGCACTTCAAACCTGTGATGATGCTCTTCAAAATGCTGAAGAGCTCCACATTGTGAAAAGATGCATTGAATCACTTGCTGCAAAGGCATCTACTGATCCAAATTTATTTGGGTGGCCTGTACTGGAGCATGGTGGCCCTTTACAGAGCCCTGGTGGAAGTGTTTTGTGGAATGGAATAAGTACTGGGGCAAGACCAAAAAACTCAAGTTTAGATTGGTGGTATGAGGATGTAACTAATTTGAGTTTACCTCTTTATAAGAAGTTGATAGCTGTCATGGAATCACGAGGTATAAGACAGGAAATTATTGCTGGTTCTCTAGCTTTCTATGCTAAAATGTATCTACCTGGTTTAAATCGACGGCAGGTTTCTGGTGAGTCCAGTACCCGTCTAACGCAGGTAGCTATGGGGTCTCCACCATCTGAAGAAGACCAGAAGATTCTGCTAGAAGAGATTGATCGATTACTCCCAATGCAGAAGGGCCTGGTACAAACAAAGTTCTTGTTTGGTCTACTTCGAACAGCCATGATTCTACGTGTGAGCCACTCTTGCATATCAAATTTAGAGAAAAGGATTGGGATGCAGCTTGATCAAGCTACTCTGGAAGATCTCTTGATGCCAAATTTCTCCTATTCAATGGAGACACTTTACAATGTTGACTGTGTACAGAGAATTCTCGATCATTTCCTTGCCATGGATCAAGTTGCAGGTGCTGCCTCTCCATGCTCAATTGATGATGGCCAGTTGATTGGATCACCTTCACTGACACCAATTACCATGGTAGCCAAGCTGATTGATGGTTACCTTGCAGAGGTTGCCCCAGATGTTAACCTAAAGCTTCCGAAGTTCCAACTCCTTGCAGCTGCCGTTCCAGAATATGCCAGGCCTTTGGATGACGGGTTATATCGTGCTATAGATATTTATTTGAAGTCTCACCCATGGTTGGTGGAGTCTGAGAGAGAGCAACTATGCAGGCTGATGGATTGCCAGAAGCTCTCATTAGAAGCATGCACCCATGCTGCGCAGAATGAGAGGCTACCCATCAGAATAATAGTTCAAGTTCTATTTTTCGAGCAGCTCCAGCTCCGGACATCAATCGCCGGTTGCTTTCTAGTTTCAGACAATCTTGACGGATCAAGACAGTTAAGGAGTGGTTTTGTTGGATCTACCGAGGGTGGCTGGGCGTCAGCCGCGAAGGAAAATCAGGTTTTGAAAGTGGGAATGGATAACATGAGGATGAGGGTGTCTGAGCTTGAGAAGGAGTGCTCAAACATGAGGCAGGAGATTGAGAAATTGGGTCGTGCAAAGGGAGGATCAAGCACTTGGGGAACTGTGTCTAAGAAACTTGGGTTTAAGATTAAGTCTCAGATGTGTAGTGCTCAAGAAGGATCAGTTAGCAACCAGAACAATGGTAATAGTAAGGTTGAGAAGTTGAAGGACAGACATGTAAAGCACAAGAAAAGTTCTTCTATTAGTGACAAAGCATCAGTCTCTTCAATTGTTCATTCCTAG 1935 0.4403 MACVKLGSKVDAFQCQGQAWFCTTGLPSDIVVEVGEMSFHLHKFPLLSRSGVLERMIAEVSELEEECVIRLQDIPGGAKTFELVAKFCYGVKLELTASNVVYLWCAAEQLEMTEEYGEGNLISQAETFFNQVVLRSWKDSLRALQTCDDALQNAEELHIVKRCIESLAAKASTDPNLFGWPVLEHGGPLQSPGGSVLWNGISTGARPKNSSLDWWYEDVTNLSLPLYKKLIAVMESRGIRQEIIAGSLAFYAKMYLPGLNRRQVSGESSTRLTQVAMGSPPSEEDQKILLEEIDRLLPMQKGLVQTKFLFGLLRTAMILRVSHSCISNLEKRIGMQLDQATLEDLLMPNFSYSMETLYNVDCVQRILDHFLAMDQVAGAASPCSIDDGQLIGSPSLTPITMVAKLIDGYLAEVAPDVNLKLPKFQLLAAAVPEYARPLDDGLYRAIDIYLKSHPWLVESEREQLCRLMDCQKLSLEACTHAAQNERLPIRIIVQVLFFEQLQLRTSIAGCFLVSDNLDGSRQLRSGFVGSTEGGWASAAKENQVLKVGMDNMRMRVSELEKECSNMRQEIEKLGRAKGGSSTWGTVSKKLGFKIKSQMCSAQEGSVSNQNNGNSKVEKLKDRHVKHKKSSSISDKASVSSIVHS* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2504 644 Pfam NPH3 family 213 478 IPR027356 -
Apr1g2504 644 Gene3D Potassium Channel Kv1.1; Chain A 16 148 IPR011333 -
Apr1g2504 644 PANTHER - 1 618 - -
Apr1g2504 644 CDD BTB_POZ_NPY3-like 19 122 - -
Apr1g2504 644 Coils Coil 542 576 - -
Apr1g2504 644 PANTHER OS12G0117600 PROTEIN 1 618 IPR043454 -
Apr1g2504 644 ProSiteProfiles BTB domain profile. 28 97 IPR000210 GO:0005515
Apr1g2504 644 ProSiteProfiles NPH3 domain profile. 213 502 IPR027356 -
Apr1g2504 644 MobiDBLite consensus disorder prediction 602 644 - -
Apr1g2504 644 Pfam BTB/POZ domain 27 113 IPR000210 GO:0005515
Apr1g2504 644 SUPERFAMILY POZ domain 16 114 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2504 Apr-Chr1 34634704 34639770 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2504 8 632 EF-hand Containing Proteins AT3G44820 46.779 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2504 - - gmx:100779836 1174.46