Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2503 ATGGGCTGTGTTTTGTCAACTTTTGATGAGGATGAGAATTTTGGCAACTGCAAGGAAAGGAAGAGGGTGATCAAGCAGTTACTGAAAGTTAGAAGGGAGTTTTCTGATTCCCTATTAGCTTATTTGAAAGCACTGAGGAACACTGGTGCCACTCTTAGGCAATTCACTGAATCTGATACATTAGAATCTGAAACTGCCTCTAATGGCTTGGCTGAGCCACCTTCTCCACCGCCCCATCTGCCTGCATCCCCTCTGCTACCACCACCACGGCCTCCTTTTCTTGCTGACAAGAGTGCAGTACAAGTTGCTGAAGAGGAAATACTAGGGAATGATGACAACAATGTTCGTACACAGCAAATTGATCCAAGTATGAGTTCATTACAGCTACTTCGCTCTGATCAAGAAATAGTAGAAATAATTGAGGAGGAGAGTTGGGAAGAAACTAAAACAGATTTTGAGGATGAAGATACAGAAGCAGAAGCTTCTGTACATTTTGAAAAGTCACGTTATGGGAAGCAACAGTTCATAGAACCAGTTTACAATAATTCCTCTGCAATGAGTTTGTATAAAAAAGACACTACAGCTATGCCTGTTGTGGTTGGTAGAAGTGGGAAAACATTGGAGGGTATAGTTAGAGAGTTAGATGAATGTTTCCTGAAAGCATCAGCATGTATAAAGGAAATTGCTGTTATTATTGATATCAGTGGAGGAGATACACTTCTGCGGCAGAATTCTGGGCATCACAATAAGAAGAGAGGCAATTCTGCGAAGGTCTTCAGTGTACTGTCATGGAGTAGGCATTCGAAGTCGCCCCATTTCACCAAAGATGCTGCTGAGTTTTCTGGTCATGGTGAACCATGCAAGCCTGGTGCTCATTGTGCCACACTTAAAAAATTATATGCTGCAGAGAAGAAACTTTTCAAGGCAATAAAGGAGGAGGGAGTTGCAGCATTGGAGTGTAAGAGGAAGTATTCGTTATTGCATAAACAAGAGGATGAGAACCTTGACTTGGTCAAGATTGACAAAACTCGATCAAGTGTTGAGAAGTTGGAGTGTGATTTGACAAGCCTACGGCTGTGCATCAGTGAAACAACTTTGTCAATTTTGGAAATTATAGATATGGAGCTTAAACCCCAGCTAGGTGCATTAACTAAAGGGTTGGCGCAAATGTGGAGGACAATGCATGAGTGCCATCGGGCCCAAGCACTTATCTCCCAGCAGTTGAGTAACCTCAGTGATAACCATAACATGATACTAAATTCTGATTATCATCACCAGGCTACAATTCAGTTTGAGACTGAGGCCTCTTATTGGTATAATAGCTTTTGCAAATTAGTAAAATCTCAACAGGAGTATGCAATGACTCTCTGTAAATGGATTGAGCTTACTGACCACCTCAGGGATGGCCAAGAATGTAGTGATCAGTCCTCTATTCTTGCCCTTTGTAAACAGTGGGAACTGGGGCTGAATGGGTTGCCTGACAAGGAGGCCTCTGAAGCAATAAAAAGCCTTTTGTCATCCATCCGTTCCATAATTGCTCAACAGGCTGAGGAAGATAACATTCTGAAAAAATTAGAAAAACTTCAAAGGAAGCTGCAAAAATGCTCCAACTCTTTGGCTGAGATGCAGGAGAAAATAGATGATGGAGATATGGCTGATACAAGCCCCAAGCACCATCCAATATATCTTAATAAAAAAAATGAAAAAGAAGCCTTAGAGAAGCAAGTGGAAAGCGTGAAAGCAAATTATGTGGATTCTGTCCAGTATAGTAGGGCCATGACCCTAAATTACCTCCAAACTAGACTTCCCTATCTCTTCCTGTCACTAATGGAATTTTCAAGTGCTTCGGCCCAGGCAATTGAGTCTATCAATACCCAGCCAAGCCAAGTAGAATCCGTTGATATTGCGTAG 1911 0.4186 MGCVLSTFDEDENFGNCKERKRVIKQLLKVRREFSDSLLAYLKALRNTGATLRQFTESDTLESETASNGLAEPPSPPPHLPASPLLPPPRPPFLADKSAVQVAEEEILGNDDNNVRTQQIDPSMSSLQLLRSDQEIVEIIEEESWEETKTDFEDEDTEAEASVHFEKSRYGKQQFIEPVYNNSSAMSLYKKDTTAMPVVVGRSGKTLEGIVRELDECFLKASACIKEIAVIIDISGGDTLLRQNSGHHNKKRGNSAKVFSVLSWSRHSKSPHFTKDAAEFSGHGEPCKPGAHCATLKKLYAAEKKLFKAIKEEGVAALECKRKYSLLHKQEDENLDLVKIDKTRSSVEKLECDLTSLRLCISETTLSILEIIDMELKPQLGALTKGLAQMWRTMHECHRAQALISQQLSNLSDNHNMILNSDYHHQATIQFETEASYWYNSFCKLVKSQQEYAMTLCKWIELTDHLRDGQECSDQSSILALCKQWELGLNGLPDKEASEAIKSLLSSIRSIIAQQAEEDNILKKLEKLQRKLQKCSNSLAEMQEKIDDGDMADTSPKHHPIYLNKKNEKEALEKQVESVKANYVDSVQYSRAMTLNYLQTRLPYLFLSLMEFSSASAQAIESINTQPSQVESVDIA* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2503 636 Pfam Protein of unknown function (DUF630) 1 58 IPR006868 -
Apr1g2503 636 Coils Coil 562 582 - -
Apr1g2503 636 MobiDBLite consensus disorder prediction 55 94 - -
Apr1g2503 636 Pfam Protein of unknown function (DUF632) 208 509 IPR006867 -
Apr1g2503 636 PANTHER REDUCTASE SUBUNIT C, PUTATIVE (DUF630 AND DUF632)-RELATED 1 632 - -
Apr1g2503 636 MobiDBLite consensus disorder prediction 71 94 - -
Apr1g2503 636 Coils Coil 511 545 - -
Apr1g2503 636 MobiDBLite consensus disorder prediction 55 70 - -
Apr1g2503 636 PANTHER UNCHARACTERIZED 1 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2503 Apr-Chr1 34622938 34629962 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2503 1 76 Acyl Lipid Metabolism Gene Families AT2G27090 33.766 1.05e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2503 - - gmx:100809759 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2503 1 34622938 34629962 Apr1g2503 1 34622938 34629962 ECH