Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2502 ATGGAGGAAGAAGTAGAAGACACGAAAACAACAGTGAGAATATTCGTTGGAGGATTGGGTGAGGGCGTGAGCACTGAAGATCTGCGAAGGTTATTCGGTTCTCTGGGCACTGTTCAGGAAATCCAAACCATCCGAACCAAAGGTCGCAGTTTTGCTTACCTTGACTTCCTCACCGACCATAAATCCCTTTCCAAACTTTTCAGCAAGTATAATGGGTGTCTGTGGAAGGGTGGAAAGCTAAGACTTGAGAAGGCCAAAGAACACTATCTCATGCGTTTGAAAAGAGAATGGGAACAAGACGCACTCGATGCCACTCAATCACCCATCACTGCTTCTAAAGACTCGGAGGAATTGCCCAACACCACGCACACTTCAAAGCCAATCACTAAACATCTCAAAATTTTCTTTCCCAAATTACAAAAGGTGAAATCCATACCATTCGGTGGAACTGGCAAACACAAATACAGTTTCCAGAATATTAAAGTTCCTGCACTCCCTGTGCATTTTTGTGATTGTGAGGAGCATTGTAGTCCTTTTGTCACAGAAAAAGAAAAGCTATCTTCTGGTGGGACAGCAGAAAGTGGTGGAATGAATGATGAAGAGATTAACATAATGAATGCTGTGATGAGCAAGCTATTTGAAAAAGAAAAGGTTACTGATGGTAAGAACCTTGCAGAGGAGCAGGATTCTTTTGAATCACCTGATGCTTCACATTTTGATGAACGTGAAGTAGATAGCGCAACAGACGAGGATGATCTCATAATTAATGTGGAGACGAAGAAAAATAAAGCAGCTTTGACAGGGAGCCAGGAACTTGAAAGGATCTTGGAAAATCAGGAATCATGGTTGAATAAAACAAAAATTGCTAAGGAAGAACCAAGCAAGAGTGTGCCTCAAGTGCAAAAAAGTAGTAATAGTAATACCAAGAAGAACAAGAAGAGAAAATCACTTCCCAAATCGGAAAGGGAAAGCAATGGGGGTGTGACTACTACTCCTGGAGGCGAGAGTATGCAGACCATTCCAGATGAGGTGGGATCTAGTGCACAACCTACCAAGCTAGAAGATGGTTTTAGGGAACCAACTAGAGTTTTATGGTCCCAAAAGTCTTCATGGAGAGAACTTCTTGGTCATGGAGGTAACACTGCTTTCAGTGCCTCTCTTATATTGCCAAAGTTTGATTCAGGGAAGAATCAAGAAAGACCTGATGATCCATGTGCATCCTCACCTACAAACAACGAAGCTGAGAACAATGAAAGGGATGGATACCTAGGCAACAAACCTACTGATACAGAAGTTATAGAAGAGCTTGCCGAAACTCAACCTACCAATAATCAAGTGACACAAGATCTTGCAGAATCTGAGCAAAATGTGGCACCAAACAAGACGGGCAGAGGTGCTTCTTGGCTGCAAAAACAATCCTGGACTCAACTGGTTCGAGAGAATAACAATTCATTTAGCATTTCACAGATTTTGCCTGGCATTACTTTACCAGAGCCAATAGCTAATAATCCCATTGTAGACCCTGAATATTCCAATGATTGCAAGCATAACTGTGTAGCTAAGGATACTGTTAATGAAGTTGTCAGTGATGGGTTTGACTTAGGGGAGATTATACCAGATAATAGTCGGCATGTTGGTGCCAATGACATTGCTTCTGCTCCAGTAGTTAAGAAATTTGAAACGAGTCCTAGGGAAAAATCAACTGAAGATGTTGAAATAGGTCAAACTTGCTCATTTATGAGAAGTGCTGCTTCTTTGAAAGAGTGGGCAAAAGCTAAGGCTGCTCTAAGTGGATCACTCAAAAGAAAACGTGGAGAGAAGTAA 1824 0.4172 MEEEVEDTKTTVRIFVGGLGEGVSTEDLRRLFGSLGTVQEIQTIRTKGRSFAYLDFLTDHKSLSKLFSKYNGCLWKGGKLRLEKAKEHYLMRLKREWEQDALDATQSPITASKDSEELPNTTHTSKPITKHLKIFFPKLQKVKSIPFGGTGKHKYSFQNIKVPALPVHFCDCEEHCSPFVTEKEKLSSGGTAESGGMNDEEINIMNAVMSKLFEKEKVTDGKNLAEEQDSFESPDASHFDEREVDSATDEDDLIINVETKKNKAALTGSQELERILENQESWLNKTKIAKEEPSKSVPQVQKSSNSNTKKNKKRKSLPKSERESNGGVTTTPGGESMQTIPDEVGSSAQPTKLEDGFREPTRVLWSQKSSWRELLGHGGNTAFSASLILPKFDSGKNQERPDDPCASSPTNNEAENNERDGYLGNKPTDTEVIEELAETQPTNNQVTQDLAESEQNVAPNKTGRGASWLQKQSWTQLVRENNNSFSISQILPGITLPEPIANNPIVDPEYSNDCKHNCVAKDTVNEVVSDGFDLGEIIPDNSRHVGANDIASAPVVKKFETSPREKSTEDVEIGQTCSFMRSAASLKEWAKAKAALSGSLKRKRGEK* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2502 607 Gene3D - 1 89 IPR012677 -
Apr1g2502 607 PANTHER TRANSCRIPTIONAL REGULATOR 4 606 - -
Apr1g2502 607 MobiDBLite consensus disorder prediction 322 346 - -
Apr1g2502 607 MobiDBLite consensus disorder prediction 104 125 - -
Apr1g2502 607 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 12 87 IPR000504 GO:0003723
Apr1g2502 607 SUPERFAMILY RNA-binding domain, RBD 4 102 IPR035979 GO:0003676
Apr1g2502 607 MobiDBLite consensus disorder prediction 288 360 - -
Apr1g2502 607 SMART rrm1_1 13 83 IPR000504 GO:0003723
Apr1g2502 607 CDD RRM_NOL8 13 86 IPR034138 -
Apr1g2502 607 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 14 71 IPR000504 GO:0003723
Apr1g2502 607 MobiDBLite consensus disorder prediction 226 244 - -
Apr1g2502 607 MobiDBLite consensus disorder prediction 392 426 - -
Apr1g2502 607 MobiDBLite consensus disorder prediction 226 253 - -
Apr1g2502 607 MobiDBLite consensus disorder prediction 401 418 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2502 - - gmx:100778779 849.736