Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2501 ATGCAAAGGAGGCGTTGCACGTTTCAGAAAAACGACTTCTTCCCGGAGGAGTCGTTTAAGAGTTGGAGCAACTATGGGCAGTCGCTAAAAAATACTCCGCAGAGGCTGAAGGATCGGATCTTAACGCGATCCAGTGAGCACGAGGAAGTGGTGGAGATGAAGGCGAGGAGTGGCCACGAGATGAAGAGGACTCTAAATTGGTGGGATCTCATGTGGTTGGGTGTCGGATGTGTCATCGGCGCCGGAATATTCGTTCTCACCGGAGTCGAGGCCAGAGAGGTTGTCGGTCCCGCGGTGATATTGTCTTATGTGGTTTCTGGTGTCTCCACCTCGCTCTCAGTCTTTTGTTACACCGAGTTTGCTGTCGAAATTCCCGTTGCCGGTGGGTCATTTTCCTACTTAAGAGTTGAGCTAGGAGACTTTGTAGCCTTCATAGCTGGTGGAAACATCCTTCTAGAATATGTAGTAAGTTGTGCCGCTGTAGCACGGTCATGGACCTCATACTTTGCCACCCTTTGCAACAAAAGCCCTGATGATTTTCGCATAGTGGTCCATAACATGAACCCTGATTATGGCCACCTTGACCCTATAGCAGTTGCAGTCCTTATAATAATATGCCTGATTATAGTCTACACCACCAAAGGCTCTTCAGTCTTCAACTACATTGCCTCAGTGGTTCACATGATCATCATTGTCTTCATTATCATTGCTGGTCTCATCCATGCCAAACCTGAAAATTATGTGCCCTTTGCTCCCTATGGTGTTAGGGGTATATTCCAAGCTTCATCCGTGCTTTACTTTGCTTATGTGGGCTTTGATGCTGTTTCAACCATGGCTGAAGAGACCAAGAACCCATCAAGGGACATTCCAATTGGTCTTCTTGGTGCAATGGTGATTACCACAGTGGCATATTGCTTGCTAGCAGCCACACTATGCCTTATGCAACCTTACAATAGAATTGACATAGATGCACCTTTTTCAGTTGCGTTCAGTGATATAGGGTGGGATTGGGCCAAGTATATTGTTGCATTTGGTGCTTTGAAAGGGATGACCTCTGTGTTGTTGGTGAGTGCAGTGGGTCAAGCTCGTTATTTAACCCACATTGCACGCACCCACATGATGCCCCCTTGGTTTGCTCATGTGGATGAGAAGACTGGGACACCTGTGAATGCTACAATTGCATTGATTGTGGCCACAGCTATAATTGCTTTTTTCACTGAACTTGAAATTCTCTCTAACCTCTTGTCAATTTCCACTCTCATCATCTTCATGTTAGTTGCAGTTGCCCTCATTGTGCGTAGGTACTATTCAAGTGGGGTGACAACAAAGGAGAACCAAATCAAGCTCATAGTGTTTCTTGTGTTAATTATGGGCTCTTCATGTGGCGCTTCATGTTATTGGGCACTTAGTAATGGTTGGATTGGCTATGCTATATTTGGATTTATTTGGGTTGTGTCTACTGGAGGGCTTTGGTTTCTTGTTCCACAAATGAAGCAGCCAAAAGTTTGGGGCGTGCCTTTAGTTCCATGGCTACCTTCGATATCTATTTTTGCTAACATATTTCTTCTTGGATCAATAGATAAAGATTCATTTATCAGGTTTGGTATCTGGACAGTACTTCTCTTGGTTTACTATATCCTCTTTGGGTTACATGCTTCATATGACACAGCTAAGGAATTTAAGACAGAAAGTATCGTTGAAAAGGAGTTAGTTTGA 1716 0.4446 MQRRRCTFQKNDFFPEESFKSWSNYGQSLKNTPQRLKDRILTRSSEHEEVVEMKARSGHEMKRTLNWWDLMWLGVGCVIGAGIFVLTGVEAREVVGPAVILSYVVSGVSTSLSVFCYTEFAVEIPVAGGSFSYLRVELGDFVAFIAGGNILLEYVVSCAAVARSWTSYFATLCNKSPDDFRIVVHNMNPDYGHLDPIAVAVLIIICLIIVYTTKGSSVFNYIASVVHMIIIVFIIIAGLIHAKPENYVPFAPYGVRGIFQASSVLYFAYVGFDAVSTMAEETKNPSRDIPIGLLGAMVITTVAYCLLAATLCLMQPYNRIDIDAPFSVAFSDIGWDWAKYIVAFGALKGMTSVLLVSAVGQARYLTHIARTHMMPPWFAHVDEKTGTPVNATIALIVATAIIAFFTELEILSNLLSISTLIIFMLVAVALIVRRYYSSGVTTKENQIKLIVFLVLIMGSSCGASCYWALSNGWIGYAIFGFIWVVSTGGLWFLVPQMKQPKVWGVPLVPWLPSISIFANIFLLGSIDKDSFIRFGIWTVLLLVYYILFGLHASYDTAKEFKTESIVEKELV* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2501 571 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 4 564 - -
Apr1g2501 571 Pfam Amino acid permease 65 496 IPR002293 GO:0016020|GO:0022857|GO:0055085
Apr1g2501 571 PANTHER CATIONIC AMINO ACID TRANSPORTER-LIKE PROTEIN 4 564 - -
Apr1g2501 571 PIRSF AA_transporter 42 502 - -
Apr1g2501 571 PIRSF AA_transporter 447 570 - -
Apr1g2501 571 Pfam C-terminus of AA_permease 503 553 IPR029485 -
Apr1g2501 571 Gene3D Amino acid/polyamine transporter I 59 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2501 Apr-Chr1 34613970 34616377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2501 2 559 Organic Solute Cotransporters AT2G34960 56.964 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2501 K03294 - gmx:100785573 925.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2501 1 34613970 34616377 Apr1g2501 1 34613970 34616377 ECH