Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2499 ATGGAGGTGTCTTCTGAGCAATCTGAAGACGTAAAACCTGAAAACCCTCCGAGTCCTGCGAAGAAGAACGGTTCAGAAGTTGCGAAAAGAGCTTTGAAAACCGCCGCAGACACTGGAGGTTCGGTTTCTGCGAGAAAGAGAGCAGAACCGAAAAATCATTCGGGTTCGGTTGCGACGAAGAGATCGGGTTCAATCGGCAGTTCCGCTAGTTCGGTTACTGCGCCGAGACGGAATAGTACTGGAGGATTGCTTCAGAAGTCGTCGATCTCCGATGGAAGAAGAAAATCCGGTGCCGATTCTGCTGTCGGCAGTAAGAGCAGCGCTTCTTCCGCCACGGAGCCTGCGCGGAGGTCGCTCCCGGAGCTCCGGCGCAGTTCTATAAGTTCTTCACGTTCCGGCGTTGCGGCAAAATCCTCGCCGGTGGGCGCGAGTTCGAGGACATCCGTTGCTTCCGGTGTGAGTAAGGTGGAAGTTGCGAAGAGGCCAGTGAGTAAGCCGGCATTGTCGGTTTCGGTGTCGTCTTCGTCGAGGAGGGTTAGTTCTTCATCGGCGGATAGCACTGCTAGTGGCGGTGGTTCTGCTAGGAGGACTGTTTCATCATCGGTGCGGTCACCGACTGTCTCGAGCGGGTTGAGAACGGCGTCTCTGTCGTCGTCGCTGGATAGGGGTTCTGCGCTGTCTGGAAGGAGGAAAGGGGCCACTGCTGATAGTAGAGATTCGCGGTTTATTGTTCTTCCGCAGGTTGAGATTAAGGCCAACGATGATTTGAGATTGGATCTTAGGGGACACAGAGTTCGCAGCCTCAATGCCAGTGGATTAAACTTATCCTCGAACTTAGAGTTTGTTTATCTTCGAGACAATCTCTTGTCTACACTGGAAGGAGTAGAAATATTGACGAGAGTGAAGGTTCTTGATTTGAGTTTTAATGAGTTTAAGGGGCCTGGATTTGAGCCTCTTGAGAATTGCAAAGTACTGCAGCAACTCTATCTTGCTGGAAATCAAATCACATCATTGGCAAGTCTTCCGCAGCTTCCTAATTTGGAGTTCCTCTCAGTAGCTCAGAATAAGTTGAAATCTCTCACTATGGCAAGTCAACCTCGACTTCAGGTTTTAGCTGCAAGCAAAAACAGAATTTCTACTCTTAAGGGTTTCCCGTATTTACCAGTTCTTGAGCATTTGCGAGTGGAGGAGAATCCTATACTTAAGATGCCTCATTTGGAAGCAGCCTCAATATTGCTAGTTGGACCTACTTTGAAAAAATACAATGATAGAGATCTCTCTCGTGAGGAAGTGGCACTAGCAAAGCGTTATCCTGTACATACAGCTTTGTGTATTAGAGATGGTTGGGAGTTCAGTCGCCCTGAAAATGCTGCAGAGTCAACTTTCCACTTTCTAGTTGAGAAATGGAAGGACTGTATTCCTCTGGGGTTTTTCCTCAAAGAGGCATCCATAGATAAACCTGTGGAAGAAGATGTGTGTTGCTGTCATTTCACAATTATTCATGATGGTGCAGCTAGTACAGACCCACCATTGGTTTTAAAATATCAATGGTTTTGTGGTGATATATCACTTTCAAATTTTGTCCCTATTTTAGATGCTACTGGAGAAACAGAGTATCCTCCTATATTTGCCATCTCTTCTCGTGTTTCACGGGGGAGTGGAATTCCAAAAATTGTAAACCTTGAAGTGCATGGGGAACTGGTAGAAGGAAGTATCATCAGGGGTGGTGCTAAGGTTGCTTGGTGTGGTGGGACTCCAGGAAAAGGTGTTGCTAGTTGGCTGCGGAGAAAGTGGAACAGCAGTCCTGTGGTCATTGCTGGGGCTGAAGATGAAGAGTATCAGCTAACCATTCATGATGTTGATTCAAGTTTAGTTTTCATGTACACACCTGTGACAGAAGAAGGTGGCAAAGGCGAACCTCAATATAAATATACAGATTTTGTAAGAGCCGCTCCTCCTTCAGTCAGTAATGTTAGAATAGTTGGGGATGCTGTTGAGGGAAATACCATGAAAGGAGTTGGTGATTATTTTGGTGGAAGGGAGGGTCCCAGCAAGTTTGAATGGTTACGGGAGAACAGTGATACTGGAGGTTTTTTGTTAGTGTCAGCTGGTACATCTGAGTACACCTTGACCAAAGAGGATGTTGGTTGTTGTTTAGCTTTTGTATACATACCTATTAATTTCGAAGGTCAGGAAGGAAAATCAATGTCAGTTTTGTCTCCTGTTGTGAGAAAAGCACCCCCTAAAGTAATGAATCTCAAAATAATTGGTGAACTGCGAGAGAATAGCAAGGTTACTGCAACTGGTATTGTAACTGGAGGAACTGAAGGATCTAGCAGAGTTCAGTGGTATAAAACATGTTCGGCAACTTTGGATGAAAACAGTCTTGAACCATTAAGTACTTCCAAAATTGCTAAAGCATTCCGCATACCTCTTGGAGCTGTGGGCTCGTACATTGTGGCAAAATATACACCCATGACTCCTGATGGTGATTCTGGTGAACCAGCATTTGTGATATCTGATAAAGCAGTTGAGACTCTTCCCCCGAGCTTGAATTTCTTATCTATCATTGGAGATTATAGTGAAGGTGGAATATTGACGGCATCATATGGATACGTTGGAGGTCATGAAGGGAAAAGTATATACAATTGGTATATTCATGAGGGTGAAGGTGATTCAGGTTCTTTGATACCAGAGGTTTCAGGATTGCAATATCGTATTACCAAAGAAGCCATTGGGAAATTCATATCATTCCAGTGTACTCCAGTACGTGATGATGGTGTTGTAGGTGACCTAAAAATTTGCATGGGCCAGGAACGTGTTCGCCCTGGAAGCCCGAGATTGCTTTCTTTACACATAGTTGGAAATGCTGTTGAAGGAACAATGTTACAAATTGAAAAAAAGTATTGGGGTGGTGAAGAGGGAGATTCAATTTACTGCTGGCTTAGGACCAGTTCTGATGGCACGAAAAATGAAATTATGGGTGCCACTACTGAATCATATGTGCCCTCAATTGATGACATTGGCTTCTTTATTTCTGTTTCATGTGAACCTGTTCGAAATGATTGGGCTCGTGGACCCATGCTTCTGTCTCAACAAATTGGACCTATAATATCTGGTCCCCCAACTTGTCGTTCTCTGGAATTTCTTGGATCAATGATAGAAGGGCAGCGGTTGAACTTTAATTTTGAGTATAGTGGAGGAGAGCAAGGAGGTTGTACCCATGAGTGGTTTAGGGTAAAAGACAATGGTGTGCGAGAGAAAATAAGCAGCAATGATTTTTTGGAGTTGACGCTTGAGGATATTGGTGCATCCATTGAAATAGTCTATACCCCTGTGCGCAAGGATGGACTTAAAGGCAGCCCAAAGAGCATTGTATCTGATCGGATTTCTCCAGCGGATCCTAAGGGAATGGACCTTGTAATTCCCGACTGCTGCGAAGACATAGAGCTTATGCCACAGAAAAAATATTTTGGTGGACATGAAGGGGTTGGAGAGTATATTTGGTATCAGACAAAGAGTAAGCTTGAAGGATCTGCACTACTAGATATATCTAATGCTTCTGATGTTGTAATATGTGGGACAGAGCTGATGTATAAACCATCACTTAAAGATGTTAGGGATTATTTGGCTTTGTATTGGGTGCCGACCCGTGCAGATGGAAAATGTGGTGACCCATTGATTGCAATTTCCAGTACCCCAGTTTCCCCTGCTCCTCCGATAGTTTCTAATGTACGGGTGAAAGTGTTGTCTTTGGGAATTTATTCTGGCAAAGGTGAATATTTTGGTGGACATGAAGGAGAAAGCTTATTTAGCTGGTATAGAGAAAATAACGAGGGAACCATTGAGCTGATTAGTGGGGCAAATTCAAAAATCTATGAAGTTATTGATTCAGATTACAATTGTCGATTGTTGTTTGGATATACACCAGTTCGTTCAGATTCTGTTGTGGGAGAACTTAGGTTATCTGATCCAACTGACGTTGTTTTCCCAGAGCTTCCGAATGTGGAGATGCTTGCTTTGACAGGAAAGGCAGTTGAAGGTGACATACTTACAGCTGTTGAAGTCATTCCAAATAGTGAGGCTCAACAACTTGTTTGGAGCAAGTACATGAAAGATATAAGATACCAATGGTTTTGTTCATCAGAAGTGGGAGACAGTTTTTCATATGATCCATTACCCAATCAGAGTTCTTGCTCCTATAAGGTGCGGCTAGAGGATATTGGTCGTCGATTGAAATGTGAATGTGTCGTAACTGATGTGTTTGGAAGGTCAGGAGAGGCTGTGTGCGTTGAGACCACACCTGTATTGCCAGGGATTCCTAGAATACACAAGCTGGAGATTGAGGGAAGGGGATTTCATACCAATCTCTATGCTGTTCGTGGCATTTATAGTGGTGGGAAAGAAGGCAAAAGTAGAGTCCAGTGGCTTAGATCAATGGTTGGAAGTCCTGACCTGATCTCTATACCAGGGGAAACAGGCAGGATGTATGAAGCAAATGTTGATGATGTTGGCTATAGGTTGGTGGCCATCTATACTCCTGTAAGAGAGGACGGAGTAGAGGGCCAATCAATTTCGGTATCAACAGAGCCAATTGCAGTTGAGCCTGATGTTCTTAAAGAAGTGAAGCAGAACCTTGATCTTGGATCAGTGAAGTTTGAGGTATTGTGTGACAAAGACCAAACCTCAAAAAAGATTTCATCAGTGGGCACATATGAGAGGCGAATCCTTGAAATTAATAGGAAAAGGGTCAAGGTGGTAAAGCCTGCCACGAAGACTTCTTTTCCAACTACAGAAATTCGGGGTAGTTATGCCCCTCCCTTTCATGTGGAGCTTTACAGGAATGATCAACACCGTCTAAGGATAGTAGTGGACAGTGAGAATGAAGCAGACTTGATGGTGCAGTCCCGACACATTCGAGATGTTATTGTTCTGGTGATTCGAGGACTTGCTCAGAGATTCAATAGTACTTCCCTCAATTCCCTTCTGAAGATAGAAACATAA 5004 0.4404 MEVSSEQSEDVKPENPPSPAKKNGSEVAKRALKTAADTGGSVSARKRAEPKNHSGSVATKRSGSIGSSASSVTAPRRNSTGGLLQKSSISDGRRKSGADSAVGSKSSASSATEPARRSLPELRRSSISSSRSGVAAKSSPVGASSRTSVASGVSKVEVAKRPVSKPALSVSVSSSSRRVSSSSADSTASGGGSARRTVSSSVRSPTVSSGLRTASLSSSLDRGSALSGRRKGATADSRDSRFIVLPQVEIKANDDLRLDLRGHRVRSLNASGLNLSSNLEFVYLRDNLLSTLEGVEILTRVKVLDLSFNEFKGPGFEPLENCKVLQQLYLAGNQITSLASLPQLPNLEFLSVAQNKLKSLTMASQPRLQVLAASKNRISTLKGFPYLPVLEHLRVEENPILKMPHLEAASILLVGPTLKKYNDRDLSREEVALAKRYPVHTALCIRDGWEFSRPENAAESTFHFLVEKWKDCIPLGFFLKEASIDKPVEEDVCCCHFTIIHDGAASTDPPLVLKYQWFCGDISLSNFVPILDATGETEYPPIFAISSRVSRGSGIPKIVNLEVHGELVEGSIIRGGAKVAWCGGTPGKGVASWLRRKWNSSPVVIAGAEDEEYQLTIHDVDSSLVFMYTPVTEEGGKGEPQYKYTDFVRAAPPSVSNVRIVGDAVEGNTMKGVGDYFGGREGPSKFEWLRENSDTGGFLLVSAGTSEYTLTKEDVGCCLAFVYIPINFEGQEGKSMSVLSPVVRKAPPKVMNLKIIGELRENSKVTATGIVTGGTEGSSRVQWYKTCSATLDENSLEPLSTSKIAKAFRIPLGAVGSYIVAKYTPMTPDGDSGEPAFVISDKAVETLPPSLNFLSIIGDYSEGGILTASYGYVGGHEGKSIYNWYIHEGEGDSGSLIPEVSGLQYRITKEAIGKFISFQCTPVRDDGVVGDLKICMGQERVRPGSPRLLSLHIVGNAVEGTMLQIEKKYWGGEEGDSIYCWLRTSSDGTKNEIMGATTESYVPSIDDIGFFISVSCEPVRNDWARGPMLLSQQIGPIISGPPTCRSLEFLGSMIEGQRLNFNFEYSGGEQGGCTHEWFRVKDNGVREKISSNDFLELTLEDIGASIEIVYTPVRKDGLKGSPKSIVSDRISPADPKGMDLVIPDCCEDIELMPQKKYFGGHEGVGEYIWYQTKSKLEGSALLDISNASDVVICGTELMYKPSLKDVRDYLALYWVPTRADGKCGDPLIAISSTPVSPAPPIVSNVRVKVLSLGIYSGKGEYFGGHEGESLFSWYRENNEGTIELISGANSKIYEVIDSDYNCRLLFGYTPVRSDSVVGELRLSDPTDVVFPELPNVEMLALTGKAVEGDILTAVEVIPNSEAQQLVWSKYMKDIRYQWFCSSEVGDSFSYDPLPNQSSCSYKVRLEDIGRRLKCECVVTDVFGRSGEAVCVETTPVLPGIPRIHKLEIEGRGFHTNLYAVRGIYSGGKEGKSRVQWLRSMVGSPDLISIPGETGRMYEANVDDVGYRLVAIYTPVREDGVEGQSISVSTEPIAVEPDVLKEVKQNLDLGSVKFEVLCDKDQTSKKISSVGTYERRILEINRKRVKVVKPATKTSFPTTEIRGSYAPPFHVELYRNDQHRLRIVVDSENEADLMVQSRHIRDVIVLVIRGLAQRFNSTSLNSLLKIET* 1668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2499 1667 PANTHER 187-KDA MICROTUBULE-ASSOCIATED PROTEIN AIR9 7 1667 - -
Apr1g2499 1667 ProSiteProfiles Leucine-rich repeat profile. 324 345 IPR001611 GO:0005515
Apr1g2499 1667 Gene3D Ribonuclease Inhibitor 246 314 IPR032675 -
Apr1g2499 1667 SMART LRR_sd22_2 298 321 - -
Apr1g2499 1667 SMART LRR_sd22_2 276 297 - -
Apr1g2499 1667 SMART LRR_sd22_2 344 365 - -
Apr1g2499 1667 SMART LRR_sd22_2 322 343 - -
Apr1g2499 1667 MobiDBLite consensus disorder prediction 122 152 - -
Apr1g2499 1667 MobiDBLite consensus disorder prediction 100 114 - -
Apr1g2499 1667 MobiDBLite consensus disorder prediction 167 215 - -
Apr1g2499 1667 MobiDBLite consensus disorder prediction 1 215 - -
Apr1g2499 1667 Gene3D - 947 1025 - -
Apr1g2499 1667 Gene3D - 850 931 - -
Apr1g2499 1667 Gene3D - 1332 1434 - -
Apr1g2499 1667 ProSiteProfiles Leucine-rich repeat profile. 278 299 IPR001611 GO:0005515
Apr1g2499 1667 PANTHER EXPRESSED PROTEIN 7 1667 - -
Apr1g2499 1667 SUPERFAMILY Outer arm dynein light chain 1 257 411 - -
Apr1g2499 1667 MobiDBLite consensus disorder prediction 55 91 - -
Apr1g2499 1667 Gene3D Ribonuclease Inhibitor 315 441 IPR032675 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2499 - - gmx:100807099 2777.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2499 1 34572324 34604328 Apr1g2499 1 34572324 34604328 ECH