Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2497 ATGGATTCCCCACCTTCCCAACAATCGTGGGGAAGGTCACACACATCTTCCTCATCCAAATCAAACTCCGACGCAATCCAAAGCCTCTCTTCCATCCTCAACAACCCCCACTCCTCCGACGCAACCTCTTGGGTCGGCTGGTGGTCCTCCTCCACCGCCGTCGCTCCTCCCGAATTCGCCCCCATCGCCTCCGCCAAAGCTGCCTCCGACATCTCCCGATCCGACTTCCAAACCTACCTCTCCCCAATCTCCGAACCTTACCATCGCTTCGAGGACATCCGCAACCACGCCACTAAAGAGATCAACGACATCGTTCCCGATGGCCAAGGCGAAGCCCTCGTCGCCTGCCTCCGCGAGGTTCCCTCGCTCTACTTTAAAGAAGATTTTCGCTTGGAAGATGGCGCCACGTTCCGCGCCGCGTGTCCTTTCTCTAATGTCTCCGAGAACCTCATGCTGCAGGAGAAGCTCTCGCACTACCTCGACGTCGTCGAGCTTCACCTCGTTAAAGAGATCTCGCTTCGTTCCTCTTCGTTCTTCGAAGCGCAGGGTCAGTTGCAGGACCTCAACGCTAAGATCCTCCACGGTTGCACACAAATTCGACACCTCAAGGATACCATTCGCCTCCTCGACGCCGATTTGGTCCATTCCGCGCGTCAGATTCAGGAGCTCAATGGTACCAGGACGAACCTCTTGGCGCTCTTGCAGAAACTGAGGCTTATATTTTACGTCAACCAAGCCCTTTCTGCTCTCAAATTGCTTGTTGCGGCTGCAGATTGTGCTGGAGCGCTGGATGTGACTGACGATTTGCAACATTTGCTGGATGGAGATGAGCTCACTGGTCTGCATTGCTTTCGTCATCTTAGGGATCATGTAATAGGCTTTATAGAATCCATAAACAGCATTCTTTCGGCAGAGTTTATTCGAGCGTCCTTACACGATGCTGCAGAAACAGATGTGATAATTTTGTCCAAAGCTAAGGCAAGGGCTTCTCTTCCCATGAACGGAAAGGATGATGAAGTAAAGTTGGAAGAAGAAGAAACTAATAATTTCAAAGATGGTCTTCTTCCTACTGTAATTGGATTGCTTAGAACAAGTGCTATTAAGACTGCTGTTGCTGAGTTGCTTCCTGTTCTTGCTGCTCGAGGTTCAGAGTCTGAGTTCTTTTCTGGCGACAGAGCAGTAGATGCAGATGGTGGAGGTGCATCCCTTGCTAGCAAGTTGAGGAGCCTATCATCTGATAGCTTTGTGCATCTTCTGAGTGCTATTTTCATGATAGTACAGGCACATTTAGTGCGGGCTGCTGAAGTGAAAAAGGCCATTGAATGGATTTTGAGCAACCGTGATGGTCATTATGCTGCTGATTCAGTTGTTGCTGCAATTGCTCATGGTGCTGCAGCTGCAGAAACATCCCAAGAAAGCGAGGTTCATGGTACTACATTTTTGCCATATTCACCACAAAGAAGTGTAGCCAAGGGTTCCTCATTTCAGGGAAAAGCAGTTGATGCTGTGAGCTCCTCAAACATGTCAAAAAATTTCAGAGCTGATATATTGCGAGAAAACGCAGAAGCTGTCTTTGCAGCATGTGATGCTGCTCATGGAAGATGGGCAAAGCTTCTTGGGGTCCGTGTGGTTCTCCATCCTAGGTTGAAATTGCAGGAGTTTCTGACCATATACAACATCACCCAGGAGTTCATTACTGCCACAGAAAAAATTGGTGGGAGATTGGGATACAGCATTCGTGGGACACTGCAATCACAAGCCAAGGCTTTTGTTGATTTTCAGCATGAATCTCGGATGGCAAAAATTAAGGCAGTGCTTGACCAGGAAACCTGGGTGGAGATAGATGTTCCTGAGGAATTTCAATCCATCATCAATTTGCTTTTTACATCTGATGCATTGACTTCTGAGAACCTTAATGACACCGAGGATGATAATTCAACCGCTTACAATGGTGTGATGACTAACCATGATGGTCTGCCGATGGCAGAAGGTGCAGAGTCAGGTGCTGAACAGAAAATTGAGCGGACTAATTCCATGGAATCATCTACAAACAGTGCAGCATCAGATAGATCCAAACCCCCGGTGGATTCAATGGAACCAAATAAAGCTCATAGTAGGATTACATCATCACAGAGTAACAATACAGAGAAAGACCATAAAAAAACTGCATCTCAGGCTCTTTACTACAAAGGTGTTGGTTATCACATGGTAAACTGTGGCTTAATATTGCTGAAGATGCTGTCAGAGTACATTGATATGAACAACCTTATGCCAACACTATCGTCAGAAGTTGTTCACCGTGTCGTAGAAATCTTGAAATATTTCAACACGAGGACATGTCAGCTTGTGCTTGGAGCTGGTGCTATGCAGGTGTCTGGTTTGAAGTCCATCACTTCTAAACACCTGGCGTTGGCAAGTCAAGTGATTAGTTTTGTACATGCTATTATTCCTGATATTCGGCAGATTCTTTTTCTTAAAGTACCCGAGACTAGAAAAGCATTGTTGCTGTCAGAGATTGATCGAATTGCTCAGGATTATAAAGTCCACCGAGATGAAATACATAGTAAATTAGTTCAGATAATGCGAGAAAGATTACTAGTTCATTTACGTGGGTTACCTCAAATTGTTGAGAGTTGGAATAGGCCTGAGGATGCTGACCCTCAGCCTAGTCAATTTGCTCGGTCCCTTACCAAGGAAGTTGGATACCTTCAACGTGTTCTATCTCGAACTTTGAATGAAGAAGATGTTCAAGCGATTTTCAGGCAAGTGGTCATTATATTTCACTCACAAATTTCAGAAGCATTTTCAAGATTTGATATAAGCACTTCTCAAGCACAGGATAGGCTATATCGTGACGTCAAACATATTCTTCAATGCATACGGTCATTGCCATCGGGTGATTTGAGTAAATCTGATACTGCAAACTGGGGCCAGCTGGACGAATTCTTGGTGCAGAGGTTTGGAACTGATGCTGTTCAGTAA 2982 0.4591 MDSPPSQQSWGRSHTSSSSKSNSDAIQSLSSILNNPHSSDATSWVGWWSSSTAVAPPEFAPIASAKAASDISRSDFQTYLSPISEPYHRFEDIRNHATKEINDIVPDGQGEALVACLREVPSLYFKEDFRLEDGATFRAACPFSNVSENLMLQEKLSHYLDVVELHLVKEISLRSSSFFEAQGQLQDLNAKILHGCTQIRHLKDTIRLLDADLVHSARQIQELNGTRTNLLALLQKLRLIFYVNQALSALKLLVAAADCAGALDVTDDLQHLLDGDELTGLHCFRHLRDHVIGFIESINSILSAEFIRASLHDAAETDVIILSKAKARASLPMNGKDDEVKLEEEETNNFKDGLLPTVIGLLRTSAIKTAVAELLPVLAARGSESEFFSGDRAVDADGGGASLASKLRSLSSDSFVHLLSAIFMIVQAHLVRAAEVKKAIEWILSNRDGHYAADSVVAAIAHGAAAAETSQESEVHGTTFLPYSPQRSVAKGSSFQGKAVDAVSSSNMSKNFRADILRENAEAVFAACDAAHGRWAKLLGVRVVLHPRLKLQEFLTIYNITQEFITATEKIGGRLGYSIRGTLQSQAKAFVDFQHESRMAKIKAVLDQETWVEIDVPEEFQSIINLLFTSDALTSENLNDTEDDNSTAYNGVMTNHDGLPMAEGAESGAEQKIERTNSMESSTNSAASDRSKPPVDSMEPNKAHSRITSSQSNNTEKDHKKTASQALYYKGVGYHMVNCGLILLKMLSEYIDMNNLMPTLSSEVVHRVVEILKYFNTRTCQLVLGAGAMQVSGLKSITSKHLALASQVISFVHAIIPDIRQILFLKVPETRKALLLSEIDRIAQDYKVHRDEIHSKLVQIMRERLLVHLRGLPQIVESWNRPEDADPQPSQFARSLTKEVGYLQRVLSRTLNEEDVQAIFRQVVIIFHSQISEAFSRFDISTSQAQDRLYRDVKHILQCIRSLPSGDLSKSDTANWGQLDEFLVQRFGTDAVQ* 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2497 993 Pfam Vps54-like protein 734 864 IPR012501 GO:0042147
Apr1g2497 993 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 54, CHLOROPLASTIC 15 992 - -
Apr1g2497 993 MobiDBLite consensus disorder prediction 1 32 - -
Apr1g2497 993 MobiDBLite consensus disorder prediction 636 721 - -
Apr1g2497 993 MobiDBLite consensus disorder prediction 671 691 - -
Apr1g2497 993 PANTHER VACUOLAR PROTEIN SORTING 54 15 992 IPR039745 GO:0000938|GO:0042147
Apr1g2497 993 Gene3D - 831 871 - -
Apr1g2497 993 MobiDBLite consensus disorder prediction 636 653 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2497 K17600 - gmx:100777704 1648.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2497 1 34549961 34565652 Apr1g2497 1 34549961 34565652 ECH