Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2496 ATGAACATCTTCAAGAAGAAAACCTCTCCCAAAGAAGCTCTGCGGACAAGTAAGAGAGAAATGTCTGTTGCAACAAGAGGAATTGAAAGGGAGATAGCATCACTTCAGATGGAGGAAAAAAAATTGGTGGCAGAGATTAAAAGAACTGCTAAAACTGGGAATGAGGCTGCCACTAGAATCTTGGCTCGTCAACTTGTTAGGTTACGTCAACAGATAACCAATTTGCAGGGAAGTCGTGCTCAGATCAGGGGTGTAGCAACTCACACACAGGCATTATATGCAAGCACTTCAATCTCTACGGGAATGAAGGGTGCAACTAAAGCAATGGTGGCAATGAATAAGCAAATGGCACCAGCAAAACAGGCTAAAGTGATTAAAGAATTCCAGAAGCAATCAGCACAATTGGACATGACGATTGAGATGATGTCAGAATCTATTGATGAAACTTTAGACAAAGATGAAGCCGAGGAAGAAACAGAAGAGCTGACTAACCAGGTTCTTGATGAAATTGGAGTGGATATTGCATCCCAGTTATCTTCTGCTCCGAAAGGTCGAATTGCTTCAAGGAATACTGAAAATGTTGCTCCAAGATCACAAGAATCCCAAGATGTTGAAGATCTTGAAAAGAGATTGGCTTCGCTCAGGAGAATATAA 654 0.4144 MNIFKKKTSPKEALRTSKREMSVATRGIEREIASLQMEEKKLVAEIKRTAKTGNEAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNKQMAPAKQAKVIKEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDIASQLSSAPKGRIASRNTENVAPRSQESQDVEDLEKRLASLRRI* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2496 217 Gene3D - 4 181 - -
Apr1g2496 217 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 2 217 IPR005024 GO:0007034
Apr1g2496 217 MobiDBLite consensus disorder prediction 181 198 - -
Apr1g2496 217 MobiDBLite consensus disorder prediction 199 217 - -
Apr1g2496 217 Coils Coil 197 217 - -
Apr1g2496 217 MobiDBLite consensus disorder prediction 179 217 - -
Apr1g2496 217 Pfam Snf7 17 185 IPR005024 GO:0007034
Apr1g2496 217 Coils Coil 145 165 - -
Apr1g2496 217 PANTHER BNAA08G30490D PROTEIN 2 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2496 Apr-Chr1 34541325 34547174 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2496 K12191 - gmx:100777179 369.777