Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2495 ATGGCCTCAGAAAATGGAGAGAAAGTAGAGCTTGGTCTCAATGAAGTTCCCGAGACAAAGGCAAAGAAAGATTGGGTTCTTTTATCCCTAAGGGTGGTTGCATTTTTGGCCACAGCATCTGCAGCACTTGTGATGGCTCTTAACAAACAGACCAAAACCTTAGTAGTTGCCACAGTTGGTAGCACCCCAATAACAGCTACTCTTTCCGCAAAGTTTAACCAAACTCCAGCTTTTGTATTCTTTGTCATAGCCAATGGAAATGCCAGTCTCCATAACTTGGTGATGGTAGCAATCCAGATATTAGGACCCCAATATGATTTCAAAGGACTTCGCCTTGCATTGATTGCTATATTAGACATGATGACAATGGCTCTAGCATCAGCTGGAGATGGTGCAGCAACATTCATGTCTGAATTGGGAAGGAATGGTAATTCGCATGCAAGATGGGATAAGATATGTGACAAATTCGAGAGCTACTGCAACCGAGGTGGTGCTGCCCTCATTGCCTCTTTCATTGGCTTCATTCTCCTCCTCATTATTACAGTAATCTCCATTATCAAGTTGCTCAAGCCAAGTCGCATTGCTGTTAACCATGCTTCTTCATAA 606 0.4307 MASENGEKVELGLNEVPETKAKKDWVLLSLRVVAFLATASAALVMALNKQTKTLVVATVGSTPITATLSAKFNQTPAFVFFVIANGNASLHNLVMVAIQILGPQYDFKGLRLALIAILDMMTMALASAGDGAATFMSELGRNGNSHARWDKICDKFESYCNRGGAALIASFIGFILLLIITVISIIKLLKPSRIAVNHASS* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2495 201 TIGRFAM A_tha_TIGR01569: plant integral membrane protein TIGR01569 28 188 IPR006459 -
Apr1g2495 201 PANTHER CASP-LIKE PROTEIN 1B2 17 190 - -
Apr1g2495 201 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 17 190 - -
Apr1g2495 201 Pfam Casparian strip membrane protein domain 22 176 IPR006702 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2495 Apr-Chr1 34536011 34536896 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2495 - - gmx:100792043 322.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2495 1 34536011 34536896 Apr1g2495 1 34536011 34536896 ECH