Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2493 ATGACACCAACAACGCAGCAGCAGCAACAACAACAACTGAACAACATAATCAACGCCCTCGTAGGCTTCGGAGACTTCGCCACGTGGCTGACCATTCTCTCCACGGTCAACACCACACACCTTCCAGTAAGCGCCACACTATTGGTCCCACAAGACGCCGCCATGGACCTTCCCTCACAGGATCCCTTCCTCTTCCCATACCACGTCGTTCCTCAACGCCTTACCTTCTCCGACCTCCTCCTTTTCCCTTGCCGCACGCGCCTCCCCACGCTCCTCCGCGGTAAATCCATCTCCGTCACCGACAATTCCCCTCTCAACTTCTCCCTCGACGCCACGCCGATCACTCACCCGGACCTATTTTCCACCCCAAACGTCGTCGTACACGGCATCCACTCTTTCCTCAATTACTCTCTCTTCGGCGACGGAATCCCTCCCTCGCCGCCGTTCCTCCCCATCGGAGACGCCATCGGCACAGAGTGGAACTCCGGCGGGTCCTCCTCCCGCCTCAACGACGTCGTTTTCTTCTCCTTTTGTTTCGTTCTTGGAGTACTTGTCTTCTTTGCGTTTTGTTAA 573 0.5637 MTPTTQQQQQQQLNNIINALVGFGDFATWLTILSTVNTTHLPVSATLLVPQDAAMDLPSQDPFLFPYHVVPQRLTFSDLLLFPCRTRLPTLLRGKSISVTDNSPLNFSLDATPITHPDLFSTPNVVVHGIHSFLNYSLFGDGIPPSPPFLPIGDAIGTEWNSGGSSSRLNDVVFFSFCFVLGVLVFFAFC* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2493 190 ProSiteProfiles FAS1/BIgH3 domain profile. 10 134 IPR000782 -
Apr1g2493 190 PANTHER FASCICLIN-LIKE ARABINOGALACTAN FAMILY PROTEIN 6 147 - -
Apr1g2493 190 SMART fasc_3 46 138 IPR000782 -
Apr1g2493 190 PANTHER OS02G0491300 PROTEIN-RELATED 6 147 - -
Apr1g2493 190 SUPERFAMILY FAS1 domain 13 134 IPR036378 -
Apr1g2493 190 Gene3D FAS1 domain 1 135 IPR036378 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2493 - - gmx:102660514 248.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2493 1 34522004 34522576 Apr1g2493 1 34522004 34522576 ECH