Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2492 ATGGCGGCTTCTGATCCCAACAAATTGATCTCCAAAGCTGATAAGCTAACACGACTCAGTCTCACGAGGTGGAGTGCAGATTGGAAAAATGCTACTGTTCTTTATGAGCAGGCAGCTAATGGGTTTAGAGTTGCCAAGGACTATGAGAAAGCCAAAATAGCATTCGAGAAGGCTTCGAAAGGACAAGAGATGCTTTCTTCACCTTGGGATGCAGCTAAGCACATGGAATCTGCTGCTGCTCTGGCAAAGGATCTAAGCCAGTGGCAAGAAGTAGGGGACTTCTATCGAAGGGCATCTGAACTGTACATGGAGTGTGGGAGACCACAACCTGCATCAGATGCACTTGCAAAGGGAGCCCGTGCTTTGGAAGATACCATGTCTGAAGAAGCTATTCAGCTGTATACAGATGCTTGCACAATTCTTGAAGACGATGGGAGAGAACAAATGGCCTTTGATCTTTATCGTGCTGCCACTAATGTTTATGTAAAGCTTGAAAAATATACAGATGCAGCATCTTTCATGTTGAGATTAGGCTTGGCTGCTGACAAGTGTAATGCTACCAATAGTCAGTGCAAGGCGTATCTAAGTGCAATTATTATCTACCTTTATGCTCATGACTTTAAGCAAGCTGAGAAGTGCTATAACGACTGTTCTCAGATTGATGCTTTTCTCAGAAGTGACCAGAATCGTTGTGCTAGCAAGCTACTTGCTGCCTACACGGATGGAGATGTTGAAGAAATCAAACGCATAGCTCAATCAAGTACAATTTCAAATCTTGATCATGTGATCATTAGACTTGCGAGGAAACTTCCAACAGGTGATGTGAGTGCATTGAAGGCTGACAATGCTGCTGATGAAGAACTACTGGATGAAAATGACCTGACTTAA 888 0.4347 MAASDPNKLISKADKLTRLSLTRWSADWKNATVLYEQAANGFRVAKDYEKAKIAFEKASKGQEMLSSPWDAAKHMESAAALAKDLSQWQEVGDFYRRASELYMECGRPQPASDALAKGARALEDTMSEEAIQLYTDACTILEDDGREQMAFDLYRAATNVYVKLEKYTDAASFMLRLGLAADKCNATNSQCKAYLSAIIIYLYAHDFKQAEKCYNDCSQIDAFLRSDQNRCASKLLAAYTDGDVEEIKRIAQSSTISNLDHVIIRLARKLPTGDVSALKADNAADEELLDENDLT* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2492 295 Pfam Soluble NSF attachment protein, SNAP 5 264 - -
Apr1g2492 295 Gene3D Tetratricopeptide repeat domain 2 272 IPR011990 GO:0005515
Apr1g2492 295 PANTHER SOLUBLE NSF ATTACHMENT PROTEIN SNAP 2 285 IPR000744 GO:0006886
Apr1g2492 295 PANTHER GAMMA-SOLUBLE NSF ATTACHMENT PROTEIN 2 285 - -
Apr1g2492 295 SUPERFAMILY TPR-like 7 249 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2492 Apr-Chr1 34514610 34519868 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2492 K21198 - gmx:100776112 538.495