Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2490 ATGCATAGATATGAGGTGGTTTTCATCGCTACCCCAGCCCTGGGCAATCTCGTTCCAGCCGTGGAATTCGCCAACCTCATAACCAAACACGACCCTCGATTCTCTGCAACCGTTCTCACTTTCTCCATGCCACAACGACCACTCATCAACACCTATGTCCAAGAACGTCCTTCCTCATCCACTAATGTCCGATTCCTCCATCTTCCTTCGGTCGACCCTCCCACACCCGACCAGTACCAATCCACCATCGCCTTCCTCTCCCTCTTCATACACAATCACAAGCTCCAAGTCAAACAAGCACTCCTCAACCTCATCCCAACCGAGTCAAAGCCCCACTCGCCTCCACTCGCCGCCGTGTTCGTCGACATGTTCTCCACCCCCCTCATCGACGTCGCCGCCGAGCTCGCCGTCCCTTGCTACCTCTTCTTCCCTTCGCCGGCGAGCTTCCTCGGCTTCGCGCTTCACCTCCCCCCAGTCGACGCGGTCAAGTCAGAATCCGAGTTCGTGGTCCCGAGTTTCAAGAACCCCTTGCCCCGTCCGGTTTTGCCCAAGCTCGTGTTAGATTGCAACGATTCGTATACCTGGTTTTCATATCATGCGGGAAGGTACAGGGAAACAAAGGGCATTGTCGTAAATACATTGCAGGAGCTGGAACCTCACGCGCTTCAGTCACTCTACAGCGATTCGAAGTGGCCCCGCGTTTACCCAATTGGGCCTGTTCTTGACCTTGCTGGGTCGGCCCAATGGGATCCAAAACCGGCCCAATATAAGCGCATCATGGAGTGGCTAGATCAGCAGGCAGCTTCGTCCGTGGTGTTTCTCTGCTTTGGTAGCATGGGAAGCTTAAAGGCGAACCAGGTGGAGCAGATTGCAGTTGGGCTTGAACGGGCCGGGGTGAGGTTCTTGTGGGCTTTGCGGGAACCTCCGAAGGCCCAATTACAAGACCCAACGGAATACGCAAATCATGAAGATGTTTTGCCAGATGGGTTTTTGGAACGAACGGCTGGGATTGGTTTGGTGTGTGGATGGGTCCCACAAGTGAAGGTGCTGGCCCACAATGCCGTAGGGGGGTTTGTGTCGCATTGTGGTTGGAACTCAATATTAGAGAGCTTGTGGCACGGTGTACCAATTGCCACGTGGCCGGTGTACGCAGAGCAACAAATGAACGCGTTCCAGATGGTTAAGGAATTGGGATTGGCTTTGGAGATTAAGTTGGATTATAGAGTGGGTGATCTGGTGCGGGCAGAAGAAGTAGAGAAGGGTGTGCGGTCGCTGATGAAGGGTAGCGATGAGATCAGAAGAAAGGTGAAGGAGATGAGTGACAAGTGTAGAGGGGCATTCATGGAAAACGGCTCATCTTACGCTAACCTAGGGTCCCTGATTCAAGAGTTGACAAATTGA 1401 0.5339 MHRYEVVFIATPALGNLVPAVEFANLITKHDPRFSATVLTFSMPQRPLINTYVQERPSSSTNVRFLHLPSVDPPTPDQYQSTIAFLSLFIHNHKLQVKQALLNLIPTESKPHSPPLAAVFVDMFSTPLIDVAAELAVPCYLFFPSPASFLGFALHLPPVDAVKSESEFVVPSFKNPLPRPVLPKLVLDCNDSYTWFSYHAGRYRETKGIVVNTLQELEPHALQSLYSDSKWPRVYPIGPVLDLAGSAQWDPKPAQYKRIMEWLDQQAASSVVFLCFGSMGSLKANQVEQIAVGLERAGVRFLWALREPPKAQLQDPTEYANHEDVLPDGFLERTAGIGLVCGWVPQVKVLAHNAVGGFVSHCGWNSILESLWHGVPIATWPVYAEQQMNAFQMVKELGLALEIKLDYRVGDLVRAEEVEKGVRSLMKGSDEIRRKVKEMSDKCRGAFMENGSSYANLGSLIQELTN* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2490 466 PANTHER GLYCOSYLTRANSFERASE 4 465 - -
Apr1g2490 466 ProSitePatterns UDP-glycosyltransferases signature. 343 386 IPR035595 -
Apr1g2490 466 PANTHER GLYCOSYLTRANSFERASE 4 465 - -
Apr1g2490 466 CDD GT1_Gtf-like 1 464 IPR002213 GO:0008194
Apr1g2490 466 Gene3D Glycogen Phosphorylase B; 7 457 - -
Apr1g2490 466 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 1 464 - -
Apr1g2490 466 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 228 397 IPR002213 GO:0008194
Apr1g2490 466 Gene3D Glycogen Phosphorylase B; 248 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2490 Apr-Chr1 34502470 34504670 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g2490 5 464 Glycosyltransferase AT2G29740 41.754 4.21e-121 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2490 - - gmx:100775567 725.317