Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2476 ATGTTCGTCGCTAAGCCCTTCTCCCTACCCCTCCATGTTTCTCCAACTAACTGCTTCAAAAACGGACCCACTTCCCGTAACGCCTTTTTCAATGTAGAACTCACTATACACGCTTCCACGCTCTGTCTCTGTTCCGTTGACTCTAACCAAGTCAATGACGGGAGCGTTTTCTCCGTTACGCCTTCCAATAGCTGCGACGTCGATTATCTTGGCGAAAGCACCAAAGGGAACTTGAACGTTAAGGTGGAGCACCTCGAGGCTTTTGGAATTGATGGACATGCTGCATTAGAAGGTCCAATAGAGGAGGTGGCCAGAACAGAAGCTAGAGAAGCTGATGATTTACTGAAAAAATTGGATATTCCGAGTCCTTATTCATCAAGAAATTCACCTCGTGGAATATTCTGCACTCGGACACTGAATCTACGATCCATTAGTGCCATCGGATATGACATGGATTATACCTTGATGCATTATAATGTGAAGGCTTGGGAAGGGCGGGCTTATGATTACTGTATGGAAAACCTCAAGAATATGGGTTTCCCTGTTGATGGACTTGCATTTGATCCAGACCTGGTTATTAGAGGCCTTGTCATAGATAAAGAGAGAGGCAATTTGGTTAAAGCTGATCGATTTGGTTATATAAAGAGAGTCATGCATGGAACCAAAATGTTATCTACTCGTGCTGTGAGTGAGATGTATGGGAGAGAACTAGTGGACCTGCGGCAGGAGAGTCGATGGGAATTTCTCAACACATTTTTCTCTGTGTCTGAAGCTGTGGCATATATGCAGTTGGTTGACAAGTTGGATGATGGGATTATACCATGCAATCTTGGCTCCTTTGATTATAAAGGGCTTTATAAGGCTGTAGTAAAAGCTCTCTTCAGGGCACATGTAGAAGGACGCCTCAAGAGTGAGATTATGTCTAACCCTGAACAGTTTGTAGAGCCTGATCCAGAATTACCCGTGGCACTTTTGGATCAGAAGGAGGCAGGCAAAAAACTCCTGCTTATTACCAACTCAGATTATCATTATACAGACAAAATGATGCATCATTCATTTAATAGATTCCTTCCTAATGACATGGGTTGGCGAGATTTATTTGACATTGTAATTGTGTCAGCAAAGAAACCAGAATTCTTCCAAATGTCACACCCCATGTATGAAGTGGTGACAGATGAGGGCCTGATGCGTCCATGCTTCAAGGCTGAAACTGGTGGTTTATACTCAGGTGGAAGCGCACAAATGGTTGAAAATTCCCTAAATATACATGGAGATGAGATATTGTATGTTGGAGACCATATTTACACTGATGTTAGTCAATCCAAAGTCCATTTGCGATGGCGAACAGCATTGATTTGTCGAGAACTAGAAGATGAGTTATCAACTGGTTTCCAAAGACAAGCATTGGTGGAGCTTATAAATCAAAAGGAGGTAGTAGGTGATCTCTTTAACCAACTACGTCTGGCTCTACAGAGGCGAAGTAAAGGGCGTCCTGCACAGACTCTTGCTGCAACTAAAATGGATGATGAAAATCTTACTGAAAGCATGCAAAAGCTACTTATTGTTATGCGAAGACTTGATGAAAAAATTGCTCCAATGCTAGAGGCAGAAGGGGAGCTCTTCAACAAAAGGTGGGGTTATCTTTCACGTGCTGGTTTGTGGGATAAAAGTCACTTGATGAGACAAATTGAGAAGTATGCAGATATATATACCTCTAGGGTGTCAAACTTTTTATATTACACACCCTTTATGTATTTCCGCTCTCAGGAACAGAACCTTGCACACGATTCATACACACACTATTGCTCACAACTTGGCAAATTTTCTTCCCATGGAAACTTGGAAGAAAATGGAGAAATTGAAAAAAAAAATGTCTCTGGTTGA 1884 0.4204 MFVAKPFSLPLHVSPTNCFKNGPTSRNAFFNVELTIHASTLCLCSVDSNQVNDGSVFSVTPSNSCDVDYLGESTKGNLNVKVEHLEAFGIDGHAALEGPIEEVARTEAREADDLLKKLDIPSPYSSRNSPRGIFCTRTLNLRSISAIGYDMDYTLMHYNVKAWEGRAYDYCMENLKNMGFPVDGLAFDPDLVIRGLVIDKERGNLVKADRFGYIKRVMHGTKMLSTRAVSEMYGRELVDLRQESRWEFLNTFFSVSEAVAYMQLVDKLDDGIIPCNLGSFDYKGLYKAVVKALFRAHVEGRLKSEIMSNPEQFVEPDPELPVALLDQKEAGKKLLLITNSDYHYTDKMMHHSFNRFLPNDMGWRDLFDIVIVSAKKPEFFQMSHPMYEVVTDEGLMRPCFKAETGGLYSGGSAQMVENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALICRELEDELSTGFQRQALVELINQKEVVGDLFNQLRLALQRRSKGRPAQTLAATKMDDENLTESMQKLLIVMRRLDEKIAPMLEAEGELFNKRWGYLSRAGLWDKSHLMRQIEKYADIYTSRVSNFLYYTPFMYFRSQEQNLAHDSYTHYCSQLGKFSSHGNLEENGEIEKKNVSG* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2476 627 SUPERFAMILY HAD-like 130 598 IPR036412 -
Apr1g2476 627 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 50 605 IPR008380 -
Apr1g2476 627 PANTHER HAD-SUPERFAMILY HYDROLASE, SUBFAMILY IG, 5'-NUCLEOTIDASE 50 605 - -
Apr1g2476 627 TIGRFAM HAD-IG-Ncltidse: HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase 133 466 IPR008380 -
Apr1g2476 627 Pfam 5' nucleotidase family 133 597 IPR008380 -
Apr1g2476 627 CDD HAD_cN-II 134 467 - -
Apr1g2476 627 Gene3D - 295 479 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2476 Apr-Chr1 34351299 34365922 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2476 - - gmx:100800826 1002.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2476 1 34351299 34365922 Apr1g2476 1 34351299 34365922 ECH
Apr9g2377 9 31336272 31343282 Apr1g2476 1 34351299 34365922 PCT