Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2469 ATGGAGGACCAGCCATCATCATCAACAACATCAAAGACTGCTTCTTTGGATGCTCCCCTTCATTTGATTGGGTTCGAGATTGAAGATTTGTCACCGCAAAGAGTCTCAGGCCGTCTCCTTGTGACCCAAAAGTGCTGCCAGCCATTTAAAGTGCTTCATGGAGGGGTATCGGCAATGATAGCAGAGTCATTGGCGAGCATGGGAGCACATATGGCTTCTGGGTATCAGAGAGTGGCTGGAATTCAGCTTAGTATTAACCATTTGAAACGAGCAGAGATGGGTGACTTGCTACACGTTGAAGCTACCCCTTTAAATGTCGGAAGAACCATTCAGGTGTGGGAGGTGAGAATCTGGAAGATTGATCCTTCAAACTCACAAAACAGATCCTTGGTTTCATCTTCTAGGGTAACTCTACTAAGCAACATGCCTGTCCCAGATGATGCAAAAGAAGCTGCTAAAACGCTAAAGAAGTATGCAAAACTGTAA 486 0.4527 MEDQPSSSTTSKTASLDAPLHLIGFEIEDLSPQRVSGRLLVTQKCCQPFKVLHGGVSAMIAESLASMGAHMASGYQRVAGIQLSINHLKRAEMGDLLHVEATPLNVGRTIQVWEVRIWKIDPSNSQNRSLVSSSRVTLLSNMPVPDDAKEAAKTLKKYAKL* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2469 161 Pfam Thioesterase superfamily 50 121 IPR006683 -
Apr1g2469 161 PANTHER 1,4-DIHYDROXY-2-NAPHTHOYL-COA THIOESTERASE 1 5 161 - -
Apr1g2469 161 PANTHER 1,4-DIHYDROXY-2-NAPHTHOYL-COA THIOESTERASE 1 5 161 - -
Apr1g2469 161 Gene3D Hotdog Thioesterase 5 141 - -
Apr1g2469 161 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 20 138 IPR029069 -
Apr1g2469 161 CDD PaaI_thioesterase 22 137 - -
Apr1g2469 161 TIGRFAM unchar_dom_1: uncharacterized domain 1 21 128 IPR003736 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2469 Apr-Chr1 34293161 34297330 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2469 K19222 - gmx:100527403 255.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2469 1 34293161 34297330 Apr1g2469 1 34293161 34297330 ECH