Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2465 ATGTTAGCTTCTTCGCTCTCCTTCTTTCATTCTCGTGCTTCCTCTTCCTCTTCCCTATTGACAATTTCAACGCCAAATCCCAAACCCTCTCTTTTGTTACCATTTGTTGTTGAAGCCAATTCCAGAACCCGAAGAGAAGACAGGACTGCACGCCACGTTCGTATCAGGAAGAAGGTTGAAGGGACACCTGAAAGACCAAGATTGTCTGTTTATAGATCCAACAAGCATCTTTCTGTCCAGGTGATAGATGACACCAAGATGCACACTCTTGCTTCGGTTTCAACAATGCAAAAGATAATTGCTGAAGAGTTTAACTATACCTCTGGCCCAACAATTGAAGTAGCAAAGAGGGTGGGTGAGATCATTGCAAAGTCCTGTTTGGAGAAAGGGATCACAAAGGTGGCCTTTGACCGAGGTGGATTTCCATACCATGGTCGTGTTCAAGCACTTGCTGATGCAGCCCGTGAACATGGCCTAGAGTTCTAA 486 0.4506 MLASSLSFFHSRASSSSSLLTISTPNPKPSLLLPFVVEANSRTRREDRTARHVRIRKKVEGTPERPRLSVYRSNKHLSVQVIDDTKMHTLASVSTMQKIIAEEFNYTSGPTIEVAKRVGEIIAKSCLEKGITKVAFDRGGFPYHGRVQALADAAREHGLEF* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2465 161 Hamap 50S ribosomal protein L18 [rplR]. 43 161 IPR004389 GO:0003735|GO:0005840|GO:0006412
Apr1g2465 161 SUPERFAMILY Translational machinery components 44 159 - -
Apr1g2465 161 CDD Ribosomal_L18_L5e 55 159 - -
Apr1g2465 161 Gene3D - 43 161 - -
Apr1g2465 161 PANTHER 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL 11 161 - -
Apr1g2465 161 PANTHER 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL 11 161 IPR005484 GO:0003735|GO:0005840|GO:0006412
Apr1g2465 161 Pfam Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 43 161 IPR005484 GO:0003735|GO:0005840|GO:0006412
Apr1g2465 161 TIGRFAM L18_bact: ribosomal protein uL18 45 161 IPR004389 GO:0003735|GO:0005840|GO:0006412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2465 K02881 - gmx:100306308 254.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2465 1 34259348 34262257 Apr1g2465 1 34259348 34262257 ECH