Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2462 ATGGCTTATTTGTTAGGCTATAATCCTTGTTCTCACTTCAGTAGAGTATTTTCCCATTATCCTTCTCTTTCTTCTTCTTCTTTTGAGGTTAACAGAGGCATTGGATTCACTCTTAAAGCCTGCTTTGAAGCCAATGGCAGTGATAATGTTAATAGGGTCTTTCTGAAGGAAAAGAAAAGGGATTTAGAGAAGGGTATTTCTGTCAGGGATGATGGCCATGATGCCACTCTTGTTAGTGTTGAAAATAGATCCCTAGGTGGAAGTCCAACCGAACCTTTTTGCTTCCCTGATCAACACTTACCGCAGAAACTTGTTGTTGCTGTTGATGTTGATGAAGTATTAGGAAACTTCGTGTCAGCTCTGAATGATTTCATAGCAGATCGGTACTCATCAAATTATTCAGTTTCTGAGTATCATGTGTATGAGTTCTTCAAGATATGGAACTGCTCACGTGATGAAGCTAATAGCCGAGTTCATGAGTTTTTTAAGACGTCATATTTCAAGTCAGGGATCCAACCTATCCCAGGTGCTCAGGCAGTGCTGCAGAAGTTATCAAGATTTTGTAACCTATCAATTGTAACATCTCGGCAAAATGCAATCAAGGATCACACAATTGAATGGATAAAAAAGAATTATGCAGGATTGTTTCAGGAGATTCACTTTGGAAACCACTTTGCTCTTGATGGGGTCTCCAGACCAAAGTCAGAGATTTGTAGGTCTTTAAATGCTAAGGTTCTTATTGATGATAACCCAAGATATGCCATAGAGTGCGCAGAAGCCGGGATTAGAGTCCTACTTTTTGATTATGAAAACTCATATCCTTGGTGCAAGACTGAGTCTGCTGATGAGCATCCTCTGGTGTACAAAGTTAAGAACTGGGAAGAAGTTGAACAACAATTGATGTCATTGATAGCATTGTAG 921 0.3952 MAYLLGYNPCSHFSRVFSHYPSLSSSSFEVNRGIGFTLKACFEANGSDNVNRVFLKEKKRDLEKGISVRDDGHDATLVSVENRSLGGSPTEPFCFPDQHLPQKLVVAVDVDEVLGNFVSALNDFIADRYSSNYSVSEYHVYEFFKIWNCSRDEANSRVHEFFKTSYFKSGIQPIPGAQAVLQKLSRFCNLSIVTSRQNAIKDHTIEWIKKNYAGLFQEIHFGNHFALDGVSRPKSEICRSLNAKVLIDDNPRYAIECAEAGIRVLLFDYENSYPWCKTESADEHPLVYKVKNWEEVEQQLMSLIAL* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2462 306 ProSiteProfiles Bacterial regulatory proteins, araC family DNA-binding domain profile. 1 31 IPR018060 GO:0003700|GO:0006355|GO:0043565
Apr1g2462 306 Pfam 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) 104 300 IPR010708 GO:0008253|GO:0009264
Apr1g2462 306 SUPERFAMILY HAD-like 94 301 IPR036412 -
Apr1g2462 306 Gene3D - 124 303 IPR023214 -
Apr1g2462 306 PANTHER NUCLEOTIDASE YQFW-RELATED 23 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2462 Apr-Chr1 34231326 34235299 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2462 - - aprc:113852922 611.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g2462 1 34231326 34235299 Apr1g2462 1 34231326 34235299 ECH
Apr9g2410 9 31553073 31557563 Apr1g2462 1 34231326 34235299 PCT