Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g2455 ATGTCGCCGTCCTCCGCCAACTCCGGCGTAAACCGCCGCCGCCTCCGGGAGGAAATTAACGGTTACGGCAATGACAACGGCGCGTCCACCGAAAAGCCTGTCCCATCGACGGCCTCATCGTCTCTGCGCAGCATCTTTGACGCCGTTCCTTCGAAGGAGCGGGAGAAGCTTAGGAGAATCCTCGTTGCTTCGGCGAAAGGTTTCTCAATAGGAGCCGGCCTCAAAGGCGGTCTCGCTCTCTTCGCGATCTTGGCGCGATTCACTCGGAAAAAGCCGCCAAGGAAGCAGGTTGTGGTGACAAATGGCGAAGCGATTGTTGCGGCTCTGAAGGAGACACTGAGATACGGTCTTTTTCTTGGAACCTTCGCCGGAACTTTTGTTTCCACGGACGAGCTTATCGGTGCTTTCGTGGGTCACCGTAGATCAGCGAGGTGGAGGGCTCTGTTAGCAGGGGCGGTTGCTGGGCCATCGATGCTTCTGACTGGGTTAGAGACGCAGCACACGAGTTTGGCCATTTACATTCTCATGCGTGCTGCTGTCCTGGCGTCTCGTTGTGGGATTAAGAGCAAACGGTTTGGGAGAATTTGTAAGCCTCTCACGTGGAAGCATGGTGACATTTTCCTCATGTGTCTCTCCTCTTCACAGATATTGTCCGCTTATATATTAAAGCAAGACAGTTTGCCAGCTTCGTATAAATCCTTTCTCAATAAACATGGTGGAAAAGATCCAGTTATCTTACAAGGTGTAAAAGATATAGCCAGTGGCAAGCCTTTCACTAATTTGAGTGAAATACATAAGTACTACAAGACCATGGGTATTGATGTGAAATTAAATCCCAATATGAAAGTCCCATGCTCGATTGTACATGGGAATCAATCATGCAGTGGACATGTCCTTTCTTTTCTCCTCCAAGCCTACAAAAGGGCACTACCTGTGTATCTTCCAGTTTATCTGATACCTGCACTAATTGTTCATAGAAAAGGACTTTTAAAAAGGCCTTGCACAATATTGACCAAGGGTCTTTTTGGTACAGCAAGATCAAGCTTGTTTCTGTCTACATATTGCGCATCAGCCTGGATGTGGACGTGCTTGCTGTTCAGGATTTTTAAAAGATGTAACATTCCAATGGTGGCCATGGGAACGTTCCCAACTGGCCTTGCATTGGCTATTGAGAAGAAAAGCAGGCGAATAGAAATATCATTATACTGCTTTGCCCGGGCTATTGAGAGTTTCTTCACATGTGTAGCTGATGCAGGATATCTGCCACAGTCAAGAAAGATCAAGAGAGCTGATGTGGTGGTTTTCAGCTTGTCAACCGCCATCATAATGCATTGTTATGCGCAGGAGAGGGAAGTGTTTAGATCTAAATATTTGAATGTTCTTGATTGGGTGTTTGGTGTGCCTCCTCCAGAATGTGAGACCCCAAGATGCAAAGATAGGTAG 1443 0.474 MSPSSANSGVNRRRLREEINGYGNDNGASTEKPVPSTASSSLRSIFDAVPSKEREKLRRILVASAKGFSIGAGLKGGLALFAILARFTRKKPPRKQVVVTNGEAIVAALKETLRYGLFLGTFAGTFVSTDELIGAFVGHRRSARWRALLAGAVAGPSMLLTGLETQHTSLAIYILMRAAVLASRCGIKSKRFGRICKPLTWKHGDIFLMCLSSSQILSAYILKQDSLPASYKSFLNKHGGKDPVILQGVKDIASGKPFTNLSEIHKYYKTMGIDVKLNPNMKVPCSIVHGNQSCSGHVLSFLLQAYKRALPVYLPVYLIPALIVHRKGLLKRPCTILTKGLFGTARSSLFLSTYCASAWMWTCLLFRIFKRCNIPMVAMGTFPTGLALAIEKKSRRIEISLYCFARAIESFFTCVADAGYLPQSRKIKRADVVVFSLSTAIIMHCYAQEREVFRSKYLNVLDWVFGVPPPECETPRCKDR* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g2455 480 PANTHER UNCHARACTERIZED 26 471 IPR026749 -
Apr1g2455 480 MobiDBLite consensus disorder prediction 23 39 - -
Apr1g2455 480 MobiDBLite consensus disorder prediction 1 39 - -
Apr1g2455 480 Pfam N-terminal cysteine-rich region of Transmembrane protein 135 292 413 IPR031926 -
Apr1g2455 480 PANTHER BNAANNG02190D PROTEIN 26 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g2455 Apr-Chr1 34177312 34183077 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g2455 - - gmx:100806036 817.379